RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 OGFRL1Q5TC84 451 aaPredicted RBP2.98□□□□□ -1.93
VRK1-205ENST00000555402 ZNF773Q6PK81 442 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 TBPL2Q6SJ96 375 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 DRAM2Q6UX65 266 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 USP50Q70EL3 339 aaPredicted RBP2.98□□□□□ -1.93
VRK1-205ENST00000555402 FA2HQ7L5A8 372 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 LINC00596Q86U02 117 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 ZFP82Q8N141 532 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 OR6K3Q8NGY3 331 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 ZMYND19Q96E35 227 aaPredicted RBP2.98□□□□□ -1.93
VRK1-205ENST00000555402 CCDC42Q96M95 316 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 APOL4Q9BPW4 351 aa2.98□□□□□ -1.93
VRK1-205ENST00000555402 DHX35Q9H5Z1 703 aaKnown RBP2.98□□□□□ -1.93
VRK1-205ENST00000555402 MARCOQ9UEW3 520 aaPredicted RBP2.98□□□□□ -1.93
VRK1-205ENST00000555402 COL27A1Q8IZC6 1860 aaPredicted RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 RPSAP08865 295 aaKnown RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 HIST1H1CP16403 213 aaKnown RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 HSD11B1P28845 292 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 SLC6A1P30531 599 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 STC1P52823 247 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 AP2S1P53680 142 aaPredicted RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 MRPS25P82663 173 aaKnown RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 MEF2CQ06413 473 aaPredicted RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 TTMPQ5BVD1 217 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 CLEC12AQ5QGZ9 265 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 FAM131AQ6UXB0 335 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 C16orf47Q6ZP98 133 aaPredicted RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 HS3ST5Q8IZT8 346 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 OR4K17Q8NGC6 315 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 OR8K1Q8NGG5 319 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 PTH2Q96A98 100 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 FMC1Q96HJ9 113 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 PPP1R36Q96LQ0 422 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 GPR22Q99680 433 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 THTPAQ9BU02 230 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 ARL6Q9H0F7 186 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 DHCR7Q9UBM7 475 aaKnown RBP2.97□□□□□ -1.93
VRK1-205ENST00000555402 TAC3Q9UHF0 121 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 GUCA1BQ9UMX6 200 aa2.97□□□□□ -1.93
VRK1-205ENST00000555402 TICRRQ7Z2Z1 1910 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 A0A1W2PQL4 384 aaPredicted RBP2.96□□□□□ -1.94
VRK1-205ENST00000555402 A0A1W2PRG6 482 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 VGLL3A8MV65 326 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 C16orf90A8MZG2 172 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 M0R036 132 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 BIRC5O15392 142 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 SLC37A4O43826 429 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 IGLV3-19P01714 112 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 IGHV1-46P01743 117 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 HLA-DRAP01903 254 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 IMPA1P29218 277 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 TTPAP49638 278 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 RAP1GDS1P52306 607 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 RAB25P57735 213 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 RAB8AP61006 207 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 KRTAP13-2Q52LG2 175 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 ACSM3Q53FZ2 586 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 CLLU1OSQ5K130 101 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 FAM45BPQ6NSW5 357 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 C10orf107Q8IVU9 208 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 BLIDQ8IZY5 108 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 SPICQ8N5J4 248 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 OR5L1Q8NGL2 311 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 ACTL9Q8TC94 416 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 RBPMSQ93062 196 aaKnown RBP2.96□□□□□ -1.94
VRK1-205ENST00000555402 TMEM56Q96MV1 263 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 YPEL4Q96NS1 127 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 SEC22CQ9BRL7 303 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 MRPS26Q9BYN8 205 aaKnown RBP2.96□□□□□ -1.94
VRK1-205ENST00000555402 TSGA10Q9BZW7 698 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 INIPQ9NRY2 104 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 BABAM2Q9NXR7 383 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 SLC22A13Q9Y226 551 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 ZNF706Q9Y5V0 76 aaPredicted RBP2.96□□□□□ -1.94
VRK1-205ENST00000555402 MTCH2Q9Y6C9 303 aa2.96□□□□□ -1.94
VRK1-205ENST00000555402 LOXHD1Q8IVV2 1947 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 IZUMO1RA6ND01 250 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 ZNF233A6NK53 670 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 C21orf140B9A014 251 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 UBDO15205 165 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 FABP7O15540 132 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 CALB1P05937 261 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 OR5AC1P0C628 307 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 UGT2B7P16662 529 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 CELP19835 753 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 F8A1P23610 371 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 PRTN3P24158 256 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 SERPINB9P50453 376 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 DLX6P56179 175 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 SARNPP82979 210 aaKnown RBP2.95□□□□□ -1.94
VRK1-205ENST00000555402 Q499Y3 187 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 KPRPQ5T749 579 aaPredicted RBP2.95□□□□□ -1.94
VRK1-205ENST00000555402 PRR9Q5T870 116 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 FAM104BQ5XKR9 115 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 GALNT10Q86SR1 603 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 C10orf67Q8IYJ2 551 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 ZNF555Q8NEP9 628 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 FAM45AQ8TCE6 357 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms