RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 NMSQ5H8A3 153 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 TMEM252Q8N6L7 170 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 OR5A2Q8NGI9 324 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 OR2G3Q8NGZ4 309 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 NEK7Q8TDX7 302 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 TMEM171Q8WVE6 324 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 ZPBPQ9BS86 351 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 C20orf24Q9BUV8 137 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 HES7Q9BYE0 225 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 SLC25A31Q9H0C2 315 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 KCNJ16Q9NPI9 418 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 CCL28Q9NRJ3 127 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 DNAJC13O75165 2243 aa9.48□□□□□ -0.89
HDAC9-228ENST00000524023 SYNGR1O43759 233 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 SYNGR4O95473 234 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 CTXN2P0C2S0 81 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 DAOP14920 347 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 VDAC1P21796 283 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
HDAC9-228ENST00000524023 VAMP2P63027 116 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 ID3Q02535 119 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 ODF3L1Q8IXM7 274 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 TMEM105Q8N8V8 129 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 PLPPR1Q8TBJ4 325 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 ISOC2Q96AB3 205 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 TAAR9Q96RI9 348 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 CDX2Q99626 313 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF552Q9H707 407 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-228ENST00000524023 GLRX2Q9NS18 164 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 B4GALT7Q9UBV7 327 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 CELSR3Q9NYQ7 3312 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 AHCTF1Q8WYP5 2266 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 C19orf67A6NJJ6 358 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 TMEM50AO95807 157 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 OR13C7P0DN81 318 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 MEOX2P50222 304 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 RAB1AP62820 205 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 ZXDAP98168 799 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 ZFP62Q8NB50 900 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-228ENST00000524023 SUMF2Q8NBJ7 301 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 OR5C1Q8NGR4 320 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 OR1J1Q8NGS3 322 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 MRPL30Q8TCC3 161 aaKnown RBP9.47□□□□□ -0.89
HDAC9-228ENST00000524023 POM121L2Q96KW2 1035 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 HIST1H2AAQ96QV6 131 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 RARRES2Q99969 163 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 ABHD14AQ9BUJ0 271 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 SPRY4Q9C004 299 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 SMDT1Q9H4I9 107 aa9.47□□□□□ -0.89
HDAC9-228ENST00000524023 A0A1W2PPH5 198 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 CD300LBA8K4G0 201 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 FAM166BA8MTA8 275 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 H0Y980 276 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 GPR37O15354 613 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 HSPA12AO43301 675 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 CST7O76096 145 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 MMP9P14780 707 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 AGAP20933 346 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 ARR3P36575 388 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 MAGEA5P43359 124 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 DYNLT3P51808 116 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 CCL20P78556 96 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 ESPL1Q14674 2120 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 RHEBQ15382 184 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 TGIF1Q15583 401 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 ABHD17BQ5VST6 288 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 PCSK4Q6UW60 755 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 C20orf204Q6ZNR8 217 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 CMTM1Q8IZ96 169 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 ZNF561Q8N587 486 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 OR5D13Q8NGL4 314 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 SNIP1Q8TAD8 396 aaKnown RBP9.46□□□□□ -0.89
HDAC9-228ENST00000524023 CD300LFQ8TDQ1 290 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 OR5P3Q8WZ94 311 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 GTF3AQ92664 365 aaKnown RBP9.46□□□□□ -0.89
HDAC9-228ENST00000524023 IL22RA2Q969J5 263 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 DOCK7Q96N67 2140 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 TTTY12Q9BZ98 90 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 RIMS4Q9H426 269 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-228ENST00000524023 PLK3Q9H4B4 646 aa9.46□□□□□ -0.89
HDAC9-228ENST00000524023 ZDBF2Q9HCK1 2354 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 FRYQ5TBA9 3013 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 ARHGAP21Q5T5U3 1957 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 A6NLC8 198 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 CDRT15L2A8MXV6 281 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 C9orf172C9J069 976 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 TNFSF12O43508 249 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 CHST1O43916 411 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 PGLYRP1O75594 196 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-228ENST00000524023 SLC34A2O95436 690 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 SULT1A1P50225 295 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 BAXQ07812 192 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 KRBOX4Q5JUW0 171 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 LINC00596Q86U02 117 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 IL22RA1Q8N6P7 574 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 OR8G5Q8NG78 346 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 APH1AQ96BI3 265 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 ZNF488Q96MN9 340 aa9.46□□□□□ -0.9
HDAC9-228ENST00000524023 STRADBQ9C0K7 418 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms