RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CLEC4MQ9H2X3 399 aaPredicted RBP3.11□□□□□ -1.91
RTN4-208ENST00000404909 IFT22Q9H7X7 185 aa3.11□□□□□ -1.91
RTN4-208ENST00000404909 DUX4Q9UBX2 424 aa3.11□□□□□ -1.91
RTN4-208ENST00000404909 ZNF107Q9UII5 783 aaPredicted RBP3.11□□□□□ -1.91
RTN4-208ENST00000404909 KIF25Q9UIL4 384 aa3.11□□□□□ -1.91
RTN4-208ENST00000404909 MALRD1Q5VYJ5 2156 aa3.11□□□□□ -1.91
RTN4-208ENST00000404909 GCN1Q92616 2671 aaKnown RBP3.11□□□□□ -1.91
RTN4-208ENST00000404909 CCDC168Q8NDH2 2452 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PPIAL4EA0A075B759 164 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PPIAL4DF5H284 164 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TMEM178BH3BS89 294 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 IFNL4K9M1U5 179 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 NDUFB6O95139 128 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 DHFRP00374 187 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 SCTP09683 121 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 DANCRP0C864 163 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ZNF735P0CB33 412 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PPIAL4FP0DN26 164 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 NAT1P18440 290 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PI3P19957 117 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TBPP20226 339 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 NFYAP23511 347 aaPredicted RBP3.1□□□□□ -1.91
RTN4-208ENST00000404909 OR3A1P47881 315 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 GLIPR1P48060 266 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 FXYD4P59646 89 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 CDK10Q15131 360 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ACTBL2Q562R1 376 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 BTN2A1Q7KYR7 527 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 OVCH2Q7RTZ1 564 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TMEM17Q86X19 198 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 FAM216BQ8N7L0 139 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 OR6F1Q8NGZ6 308 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ANGPTL6Q8NI99 470 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 DEDD2Q8WXF8 326 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ZNF2Q9BSG1 426 aaPredicted RBP3.1□□□□□ -1.91
RTN4-208ENST00000404909 RIMS4Q9H426 269 aaPredicted RBP3.1□□□□□ -1.91
RTN4-208ENST00000404909 Q9N2K0 584 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 NECAP2Q9NVZ3 263 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PPIAL4AQ9Y536 164 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 KLF2Q9Y5W3 355 aaPredicted RBP3.1□□□□□ -1.91
RTN4-208ENST00000404909 WNK2Q9Y3S1 2297 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TRAV38-1A0A0B4J264 116 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 A0A0B4J293 547 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TMEM30CPA0ZSE6 113 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 FABP7O15540 132 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 GLAP06280 429 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 LMO1P25800 156 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 FCGR2CP31995 323 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 MDH2P40926 338 aaKnown RBP3.1□□□□□ -1.91
RTN4-208ENST00000404909 PPOXP50336 477 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 BCAP31P51572 246 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 VAX1Q5SQQ9 334 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 AVPI1Q5T686 147 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ZNF497Q6ZNH5 498 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 OR13C8Q8NGS7 320 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TERB2Q8NHR7 220 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 MARCH1Q8TCQ1 289 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 MRGPRDQ8TDS7 321 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TOMM40LQ969M1 308 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 KIRREL1Q96J84 757 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 DCTN5Q9BTE1 182 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 SHARPINQ9H0F6 387 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 HECTD1Q9ULT8 2610 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ANAPC10Q9UM13 185 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 MAB21L2Q9Y586 359 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ALG5Q9Y673 324 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 KIR2DS1A0A191URI9 304 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TRDCB7Z8K6 153 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 H7C1Q1 480 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 LGALS8O00214 317 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 HSPA12AO43301 675 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 NDUFS7O75251 213 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ZNF737O75373 536 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PEX14O75381 377 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TK1P04183 234 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PGAM2P15259 253 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 MUC1P15941 1255 aaPredicted RBP3.1□□□□□ -1.91
RTN4-208ENST00000404909 AKR1C4P17516 323 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 NDUFB7P17568 137 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 COL8A1P27658 744 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 GLP1RP43220 463 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 KIR2DS4P43632 304 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 KIR2DS1Q14954 304 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ZMYND11Q15326 602 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 LTC4SQ16873 150 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 C4orf46Q504U0 113 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 STUMQ69YW2 141 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ARRDC1Q8N5I2 433 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 UXS1Q8NBZ7 420 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 RFESDQ8TAC1 157 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 PPP1R35Q8TAP8 253 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 CAPSLQ8WWF8 208 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 COQ2Q96H96 371 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 SLC25A21Q9BQT8 299 aaPredicted RBP3.1□□□□□ -1.91
RTN4-208ENST00000404909 SEC22CQ9BRL7 303 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ZNF665Q9H7R5 613 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 TAF9BQ9HBM6 251 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 KCNIP1Q9NZI2 227 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 SLC23A1Q9UHI7 598 aa3.1□□□□□ -1.91
RTN4-208ENST00000404909 ANKRD17O75179 2603 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms