RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MMP9P14780 707 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 HIST1H1DP16402 221 aaKnown RBP11.75□□□□□ -0.53
SSBP1-201ENST00000265304 NDUFB7P17568 137 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 GLIPR1P48060 266 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 SRSF7Q16629 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
SSBP1-201ENST00000265304 PNLIPRP3Q17RR3 467 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF260Q3ZCT1 412 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 ATAD3CQ5T2N8 411 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 GLCCI1Q86VQ1 547 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 BPIFB2Q8N4F0 458 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 FAAP24Q9BTP7 215 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 CHST6Q9GZX3 395 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 ATG5Q9H1Y0 275 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 MIXL1Q9H2W2 232 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 MMP27Q9H306 513 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 PLEKHJ1Q9NW61 149 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 HIF1ANQ9NWT6 349 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 OR6C3Q9NZP0 311 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 OPN4Q9UHM6 478 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 NIPBLQ6KC79 2804 aaeCLIP11.75□□□□□ -0.53
SSBP1-201ENST00000265304 ANK3Q12955 4377 aaKnown RBP11.74□□□□□ -0.53
SSBP1-201ENST00000265304 A0A0G2JMP0 313 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 A0A0X1KG70 313 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 TMEM30CPA0ZSE6 113 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 CCDC160A6NGH7 325 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 NPIPB11E5RHQ5 1161 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 CTDSP2O14595 271 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 SMAD7O15105 426 aaKnown RBP11.74□□□□□ -0.53
SSBP1-201ENST00000265304 ELK1P19419 428 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 GZMHP20718 246 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 Q6ZS49 121 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 LINC00299Q6ZSB3 139 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 Q8N7P7 452 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 OR4M2Q8NGB6 313 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 DYRK2Q92630 601 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 WDFY2Q96P53 400 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 SOSTQ9BQB4 213 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 TMPRSS13Q9BYE2 586 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 DIABLOQ9NR28 239 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 COMMD3Q9UBI1 195 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 KIF25Q9UIL4 384 aa11.74□□□□□ -0.53
SSBP1-201ENST00000265304 SETD2Q9BYW2 2564 aaPredicted RBP11.74□□□□□ -0.53
SSBP1-201ENST00000265304 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 ORC5O43913 435 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 LY6G6DO95868 133 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 FSHBP01225 129 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 EIF4EP06730 217 aaKnown RBP11.73□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 CDK2P24941 298 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 ATXN7L3Q14CW9 347 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-201ENST00000265304 CDNFQ49AH0 187 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 HACD4Q5VWC8 232 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 BRICD5Q6PL45 260 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 METAP1DQ6UB28 335 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-201ENST00000265304 BTNL3Q6UXE8 466 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 Q6ZPA2 131 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF565Q8N9K5 539 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 OR10A7Q8NGE5 316 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
SSBP1-201ENST00000265304 UPRTQ96BW1 309 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 AUNIPQ9H7T9 357 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 ETAA1Q9NY74 926 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 ADAM30Q9UKF2 790 aa11.73□□□□□ -0.53
SSBP1-201ENST00000265304 UBE2QL1A1L167 161 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF729A6NN14 1252 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-201ENST00000265304 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 HPGDSO60760 199 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 PRTN3P24158 256 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 EDDM3BP56851 147 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 PITPNAQ00169 270 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF273Q14593 569 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 DCAF12L2Q5VW00 463 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 TRAT1Q6PIZ9 186 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 HEPN1Q6WQI6 88 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 C1orf229Q6ZS94 237 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-201ENST00000265304 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 MCFD2Q8NI22 146 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 H1FXQ92522 213 aaKnown RBP11.72□□□□□ -0.53
SSBP1-201ENST00000265304 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 RABL2AQ9UBK7 228 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-201ENST00000265304 AK3Q9UIJ7 227 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 RABL2BQ9UNT1 228 aa11.72□□□□□ -0.53
SSBP1-201ENST00000265304 MEIKINA0A087WXM9 373 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 A0A087X0M5 115 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 TRGV10A0A0A0MS01 117 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 KBTBD11-OT1A0A1B0GTJ5 212 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 A0A1B0GX30 115 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 HSPB6O14558 160 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 CLPXO76031 633 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 DIRAS3O95661 229 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 AVPP01185 164 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-201ENST00000265304 DTYMKP23919 212 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 C17orf58Q2M2W7 97 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms