RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 TIMD4Q96H15 378 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 MED30Q96HR3 178 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 CMSS1Q9BQ75 279 aaKnown RBP6.72□□□□□ -1.33
TARDBP-219ENST00000617757 HDHD3Q9BSH5 251 aaPredicted RBP6.72□□□□□ -1.33
TARDBP-219ENST00000617757 CHST6Q9GZX3 395 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 FAM234AQ9H0X4 552 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 PPA2Q9H2U2 334 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 BEX4Q9NWD9 120 aaPredicted RBP6.72□□□□□ -1.33
TARDBP-219ENST00000617757 ETAA1Q9NY74 926 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 KAAG1Q9UBP8 84 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 DUX4Q9UBX2 424 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 KLK11Q9UBX7 282 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 MTFP1Q9UDX5 166 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 EDARQ9UNE0 448 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 RBMX2Q9Y388 322 aaKnown RBP6.72□□□□□ -1.33
TARDBP-219ENST00000617757 TACC2O95359 2948 aa6.72□□□□□ -1.33
TARDBP-219ENST00000617757 CSMD2Q7Z408 3487 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 ISPDA4D126 451 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 CEACAM18A8MTB9 384 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 MGST3O14880 152 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 FCN3O75636 299 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 UPK1BO75841 260 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 RBBP9O75884 186 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 NAPSAO96009 420 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 TK1P04183 234 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 CSN2P05814 226 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 LPLP06858 475 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 IL7P13232 177 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 NAT1P18440 290 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 CBX5P45973 191 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 MRPS15P82914 257 aaKnown RBP6.71□□□□□ -1.34
TARDBP-219ENST00000617757 IFITM3Q01628 133 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 PAX5Q02548 391 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 SSBP1Q04837 148 aaKnown RBP6.71□□□□□ -1.34
TARDBP-219ENST00000617757 AESQ08117 197 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 DEFB113Q30KQ7 82 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 RSBN1Q5VWQ0 802 aaPredicted RBP6.71□□□□□ -1.34
TARDBP-219ENST00000617757 TRIQKQ629K1 86 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 SLC35E4Q6ICL7 350 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 ZNF497Q6ZNH5 498 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 Q6ZPA2 131 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 LRRC75A-AS1Q8N1F1 130 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 FGFRL1Q8N441 504 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 GVQW1Q8N7I0 195 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 TMEM185AQ8NFB2 350 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 OR5D13Q8NGL4 314 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 MRPL30Q8TCC3 161 aaKnown RBP6.71□□□□□ -1.34
TARDBP-219ENST00000617757 TRIM63Q969Q1 353 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 COQ2Q96H96 371 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 OCSTAMPQ9BR26 566 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 RIMS4Q9H426 269 aaPredicted RBP6.71□□□□□ -1.34
TARDBP-219ENST00000617757 ABCB10Q9NRK6 738 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 CTSZQ9UBR2 303 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 ZNF230Q9UIE0 474 aaPredicted RBP6.71□□□□□ -1.34
TARDBP-219ENST00000617757 ANAPC10Q9UM13 185 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 KIAA2026Q5HYC2 2103 aa6.71□□□□□ -1.34
TARDBP-219ENST00000617757 YLPM1P49750 1951 aaKnown RBP6.71□□□□□ -1.34
TARDBP-219ENST00000617757 IGKV1D-8A0A087WSZ0 117 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 TRBV6-6A0A0A6YYG2 114 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 A0A1W2PQ09 198 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 ANKRD20A5PA0PJZ0 165 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 VWC2LB2RUY7 222 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 H7C1Q1 480 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 NDUFS8O00217 210 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 NDUFB3O43676 98 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 MT-ND4P03905 459 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 FCGR3AP08637 254 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 RPS2P15880 293 aaKnown RBP6.7□□□□□ -1.34
TARDBP-219ENST00000617757 DTYMKP23919 212 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 ERP29P30040 261 aaKnown RBP6.7□□□□□ -1.34
TARDBP-219ENST00000617757 GDNFP39905 211 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 GLIPR1P48060 266 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 DSCR9P59020 149 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 ACTBP60709 375 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 ACTG1P63261 375 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 DCTN2Q13561 401 aaKnown RBP6.7□□□□□ -1.34
TARDBP-219ENST00000617757 SRSF7Q16629 238 aaKnown RBP eCLIP6.7□□□□□ -1.342e-10■■■□□ 18.4
TARDBP-219ENST00000617757 KRBOX4Q5JUW0 171 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 STEAP3Q658P3 488 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 ZNF880Q6PDB4 577 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 C16orf87Q6PH81 154 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 CLEC2AQ6UVW9 174 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 ZNF841Q6ZN19 808 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 HOGA1Q86XE5 327 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 LYSMD2Q8IV50 215 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 SPICQ8N5J4 248 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 TPRX1Q8N7U7 411 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 OR4K15Q8NH41 348 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 C10orf105Q8TEF2 133 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 CCDC107Q8WV48 283 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 MAFIPQ8WZ33 124 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 FAM168AQ92567 244 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 NINJ1Q92982 152 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 MBD6Q96DN6 1003 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 LURAP1Q96LR2 239 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 PIMREGQ9BSJ6 248 aa6.7□□□□□ -1.34
TARDBP-219ENST00000617757 PATZ1Q9HBE1 687 aaKnown RBP6.7□□□□□ -1.34
TARDBP-219ENST00000617757 CHMP1AQ9HD42 196 aaPredicted RBP6.7□□□□□ -1.34
TARDBP-219ENST00000617757 C12orf4Q9NQ89 552 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms