RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 STRADAQ7RTN6 431 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GRINAQ7Z429 371 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM220AQ7Z4H9 259 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GLT6D1Q7Z4J2 308 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 C6orf120Q7Z4R8 191 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DPPA2Q7Z7J5 298 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 S100A7AQ86SG5 101 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 NAA40Q86UY6 237 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MDP1Q86V88 176 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OOSP2Q86WS3 158 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DHFR2Q86XF0 187 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TGIF2LYQ8IUE0 185 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KLHDC8BQ8IXV7 354 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 C20orf196Q8IYI0 205 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRSS58Q8IYP2 241 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 H1FOOQ8IZA3 346 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC25A45Q8N413 288 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF843Q8N446 348 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 STX19Q8N4C7 294 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARRDC1Q8N5I2 433 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM252Q8N6L7 170 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBL4BQ8N7F7 174 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q8N7P7 452 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF676Q8N7Q3 588 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DCAF4L2Q8NA75 395 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 C11orf72Q8NBR9 251 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF439Q8NDP4 499 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC26A10Q8NG04 563 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2Z1Q8NG97 314 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR8A1Q8NGG7 326 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR52L1Q8NGH7 329 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR6T1Q8NGN1 323 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR1L8Q8NGR8 309 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10K1Q8NGX5 313 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR13G1Q8NGZ3 307 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR1P1Q8NH06 330 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4X1Q8NH49 305 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR51H1Q8NH63 302 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10D3Q8NH80 312 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR9G1Q8NH87 305 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR13C6PQ8NH95 151 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5K1Q8NHB7 308 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10J5Q8NHC4 309 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MFSD8Q8NHS3 518 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPPL2BQ8TCT7 592 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SCGB1C1Q8TD33 95 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 Q8WTZ3 238 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ORAOV1Q8WV07 137 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 LRRC29Q8WV35 223 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DCAKDQ8WVC6 231 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SKA2Q8WVK7 121 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TNFAIP8L1Q8WVP5 186 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RASSF5Q8WWW0 418 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RXFP2Q8WXD0 754 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MAFIPQ8WZ33 124 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 C11orf40Q8WZ69 217 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 LZICQ8WZA0 190 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCEAL3Q969E4 200 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IL22RA2Q969J5 263 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 YIPF5Q969M3 257 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CLDN23Q96B33 292 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM3DQ96BQ1 224 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PPCDCQ96CD2 204 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF501Q96CX3 271 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCEAL4Q96EI5 215 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CPNE2Q96FN4 548 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DCUN1D1Q96GG9 259 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ACY3Q96HD9 319 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FMC1Q96HJ9 113 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DIRAS2Q96HU8 199 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ANKRD36BP1Q96IX9 119 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC45A3Q96JT2 553 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC35E1Q96K37 410 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRAC1Q96KF2 57 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM8Q96KF7 97 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM210BQ96KR6 192 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC35G5Q96KT7 338 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FCRL1Q96LA6 429 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM19A4Q96LR4 140 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF597Q96LX8 424 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CNBD2Q96M20 576 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 YPEL4Q96NS1 127 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OLFM3Q96PB7 478 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PGLYRP2Q96PD5 576 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 QKIQ96PU8 341 aaKnown RBP eCLIP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM14Q96QK8 99 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4K3Q96R72 315 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATOH8Q96SQ7 321 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KLF6Q99612 283 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KIR2DL4Q99706 377 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SIGMAR1Q99720 223 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARHGDIGQ99819 225 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 EBF4Q9BQW3 602 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GINS3Q9BRX5 216 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM70Q9BUB7 260 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 LRRC61Q9BV99 259 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KIFC1Q9BW19 673 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF717Q9BY31 904 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GABARAPL3Q9BY60 117 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MRPL20Q9BYC9 149 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms