RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 OR4X1Q8NH49 305 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TOX2Q96NM4 488 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 METTL7AQ9H8H3 244 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 HEYLQ9NQ87 328 aaPredicted RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 SEMA5BQ9P283 1151 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 YBX2Q9Y2T7 364 aaKnown RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 CCL27Q9Y4X3 112 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 DDX60LQ5H9U9 1706 aaKnown RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 A0A087WUJ7 227 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 S1PR2O95136 353 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 NXPH2O95156 264 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 FTH1P19P0C7X4 201 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SMIM13P0DJ93 91 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 NPY1RP25929 384 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 PTGER4P35408 488 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 MPLP40238 635 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SCD5Q86SK9 330 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 GBGT1Q8N5D6 347 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ASB5Q8WWX0 329 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TMEM186Q96B77 213 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 DMRTA2Q96SC8 542 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ZNF346Q9UL40 294 aaKnown RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 ENTPD2Q9Y5L3 495 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ADAM20O43506 726 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ZIC2O95409 532 aaPredicted RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 C8AP07357 584 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TM4SF4P48230 202 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 MMDQ15546 238 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 CDC20BQ86Y33 519 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 ADTRPQ96IZ2 230 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 RARRES2Q99969 163 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 CST9LQ9H4G1 147 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TUBD1Q9UJT1 453 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SOX21Q9Y651 276 aaPredicted RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 GAGE12BA1L429 117 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 DEGS1O15121 323 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 FAM157BP0CG42 384 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 FLT3LGP49771 235 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 PMP22Q01453 160 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 DLX2Q07687 328 aaPredicted RBP4.47□□□□□ -1.69
SKP1-202ENST00000353411 TEX29Q8N6K0 151 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TWSG1Q9GZX9 223 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 CHODLQ9H9P2 273 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 SLC2A4RGQ9NR83 387 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 WDR87Q6ZQQ6 2873 aa4.47□□□□□ -1.69
SKP1-202ENST00000353411 TMEM238C9JI98 176 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 HLA-DRB1P01911 266 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 VDAC1P21796 283 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 ZFP36L2P47974 494 aaKnown RBP4.46□□□□□ -1.69
SKP1-202ENST00000353411 VEGFBP49765 207 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 SEC11AP67812 179 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 SRSF4Q08170 494 aaKnown RBP4.46□□□□□ -1.69
SKP1-202ENST00000353411 NNATQ16517 81 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 C1orf53Q5VUE5 145 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 D2HGDHQ8N465 521 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 PRSS3P2Q8NHM4 247 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 HSD17B8Q92506 261 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 TSPAN32Q96QS1 320 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 OR6C1Q96RD1 312 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 TMEM147Q9BVK8 224 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 PIGLQ9Y2B2 252 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 INSL6Q9Y581 213 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 COL11A1P12107 1806 aaPredicted RBP4.46□□□□□ -1.69
SKP1-202ENST00000353411 RALGAPA2Q2PPJ7 1873 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 ZNF831Q5JPB2 1677 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 TRAV14DV4A0A0A6YYC5 116 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 GCM2O75603 506 aaPredicted RBP4.46□□□□□ -1.69
SKP1-202ENST00000353411 KBTBD11O94819 623 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 IRF2P14316 349 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 OR1N1Q8NGS0 311 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 ERGIC1Q969X5 290 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 LPAR4Q99677 370 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 MESP1Q9BRJ9 268 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 NXF5Q9H1B4 397 aaKnown RBP4.46□□□□□ -1.69
SKP1-202ENST00000353411 INSL5Q9Y5Q6 135 aa4.46□□□□□ -1.69
SKP1-202ENST00000353411 IGHV1-69-2A0A0G2JMI3 117 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 TMEM262E9PQX1 116 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 IQCF3P0C7M6 154 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 MDKP21741 143 aaPredicted RBP4.46□□□□□ -1.7
SKP1-202ENST00000353411 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
SKP1-202ENST00000353411 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
SKP1-202ENST00000353411 WDR38Q5JTN6 314 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 OR5D13Q8NGL4 314 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 WDYHV1Q96HA8 205 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 SLC25A22Q9H936 323 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 KCNE1BA0A087WTH5 132 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 A0A0U1RQF3 1178 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 A0A1B0GTI1 187 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 PRSS37A4D1T9 235 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 M0QZQ0 153 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 CORTO00230 105 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 BTAF1O14981 1849 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 SIPA1L3O60292 1781 aaPredicted RBP4.46□□□□□ -1.7
SKP1-202ENST00000353411 ALOX12BO75342 701 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 FCGR3AP08637 254 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 PNLIPP16233 465 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 PP6455Q8WZ26 134 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 ZNF764Q96H86 408 aaPredicted RBP4.46□□□□□ -1.7
SKP1-202ENST00000353411 PGLYRP3Q96LB9 341 aa4.46□□□□□ -1.7
SKP1-202ENST00000353411 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms