RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 CYLC1P35663 651 aaPredicted RBP18.45■□□□□ 0.54
PCDHA12-201ENST00000398631 KRT2P35908 639 aa18.45■□□□□ 0.54
PCDHA12-201ENST00000398631 PTPDC1A2A3K4 754 aa18.45■□□□□ 0.54
PCDHA12-201ENST00000398631 ANO6Q4KMQ2 910 aa18.45■□□□□ 0.54
PCDHA12-201ENST00000398631 DHX58Q96C10 678 aa18.45■□□□□ 0.54
PCDHA12-201ENST00000398631 CCDC97Q96F63 343 aaPredicted RBP18.45■□□□□ 0.54
PCDHA12-201ENST00000398631 NPC1L1Q9UHC9 1359 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 ITGA6P23229 1130 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 TIMM10P62072 90 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 MAP2K1Q02750 393 aaPredicted RBP18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 PHACTR2O75167 634 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 PLVAPQ9BX97 442 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 JADE2Q9NQC1 790 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 ACTN2P35609 894 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 BRAPQ7Z569 592 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 FERMT1Q9BQL6 677 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 TCHPQ9BT92 498 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 WWC3Q9ULE0 1092 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 SHTN1A0MZ66 631 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 JAG2Q9Y219 1238 aa18.44■□□□□ 0.54
PCDHA12-201ENST00000398631 PDE8AO60658 829 aa18.43■□□□□ 0.54
PCDHA12-201ENST00000398631 CHL1O00533 1208 aa18.43■□□□□ 0.54
PCDHA12-201ENST00000398631 RUFY3Q7L099 469 aa18.43■□□□□ 0.54
PCDHA12-201ENST00000398631 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
PCDHA12-201ENST00000398631 GTPBP4Q9BZE4 634 aaKnown RBP18.43■□□□□ 0.54
PCDHA12-201ENST00000398631 PUM3Q15397 648 aaKnown RBP18.43■□□□□ 0.54
PCDHA12-201ENST00000398631 PLS1Q14651 629 aa18.43■□□□□ 0.54
PCDHA12-201ENST00000398631 SPDYE4A6NLX3 237 aa18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 HIBADHP31937 336 aaKnown RBP18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 INTS4Q96HW7 963 aaKnown RBP18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 COL17A1Q9UMD9 1497 aaPredicted RBP18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 RTL1A6NKG5 1358 aa18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 UFL1O94874 794 aa18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 C8orf34Q49A92 452 aa18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 SLC52A2Q9HAB3 445 aa18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 RBM28Q9NW13 759 aaKnown RBP18.42■□□□□ 0.54
PCDHA12-201ENST00000398631 HSP90AA4PQ58FG1 418 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 HS2ST1Q7LGA3 356 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 IMPG2Q9BZV3 1241 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 TNNI3KQ59H18 835 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 SH2D4AQ9H788 454 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 STK32BQ9NY57 414 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 CGNQ9P2M7 1197 aaKnown RBP18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 FPGT-TNNI3KV9GXZ4 949 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 SYNCQ9H7C4 482 aa18.41■□□□□ 0.54
PCDHA12-201ENST00000398631 AOPEPQ8N6M6 819 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 PLCD4Q9BRC7 762 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 DTHD1Q6ZMT9 781 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 ARHGEF10O15013 1369 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 DBNDD2Q9BQY9 259 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 DNAJC25Q9H1X3 360 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 A1BGP04217 495 aa18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 PARP1P09874 1014 aaKnown RBP18.4■□□□□ 0.54
PCDHA12-201ENST00000398631 BCCIPQ9P287 314 aaKnown RBP eCLIP18.39■□□□□ 0.54
PCDHA12-201ENST00000398631 FAM13AO94988 1023 aa18.39■□□□□ 0.53
PCDHA12-201ENST00000398631 RXRAP19793 462 aa18.39■□□□□ 0.53
PCDHA12-201ENST00000398631 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
PCDHA12-201ENST00000398631 KIAA0753Q2KHM9 967 aa18.39■□□□□ 0.53
PCDHA12-201ENST00000398631 CCDC87Q9NVE4 849 aa18.39■□□□□ 0.53
PCDHA12-201ENST00000398631 MCM7P33993 719 aa18.39■□□□□ 0.53
PCDHA12-201ENST00000398631 IQUBQ8NA54 791 aa18.39■□□□□ 0.53
PCDHA12-201ENST00000398631 GOLGA6L10A0A0M3HER8 536 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 VTI1AQ96AJ9 217 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 USP26Q9BXU7 913 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 PZPP20742 1482 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 GRM1Q13255 1194 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 APPBP2Q92624 585 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 NAP1L4Q99733 375 aaKnown RBP18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 GGA1Q9UJY5 639 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 BICDL2A1A5D9 508 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 FSD2A1L4K1 749 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 SKILP12757 684 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 LMOD1P29536 600 aaPredicted RBP18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 TMEM87BQ96K49 555 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 XAGE2Q96GT9 111 aa18.38■□□□□ 0.53
PCDHA12-201ENST00000398631 NCBP1Q09161 790 aaKnown RBP18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 CEP135Q66GS9 1140 aa18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 ATP7AQ04656 1500 aa18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
PCDHA12-201ENST00000398631 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 CKAP4Q07065 602 aaKnown RBP18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 WDR66Q8TBY9 1149 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 SLAIN2Q9P270 581 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 MAST3O60307 1309 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 ERICH4A6NGS2 130 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 CERS3Q8IU89 383 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 ZSWIM4Q9H7M6 989 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 TYRO3Q06418 890 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 KLHDC4Q8TBB5 520 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 B4E1Z4 1266 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 PRPHP41219 470 aa18.36■□□□□ 0.53
PCDHA12-201ENST00000398631 MRVI1Q9Y6F6 885 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms