RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TCRBV5S2A0A599 114 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 ODAMA1E959 279 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 ZNF729A6NN14 1252 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-221ENST00000557293 LOC110117498-PIK3R3F6TDL0 507 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 H3BN98 237 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 GP9P14770 177 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 PSMB8P28062 276 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 SNU13P55769 128 aaKnown RBP9.73□□□□□ -0.85
PSEN1-221ENST00000557293 CDC42P60953 191 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 OR2T5Q6IEZ7 315 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 Q6P435 159 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 ZNF429Q86V71 674 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 TGIF2LXQ8IUE1 241 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 OR10G2Q8NGC3 310 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 OR4D6Q8NGJ1 314 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 OR2T29Q8NH02 315 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 ASB17Q8WXJ9 295 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 DCUN1D4Q92564 292 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 RBMXL1Q96E39 390 aaKnown RBP9.73□□□□□ -0.85
PSEN1-221ENST00000557293 KLK15Q9H2R5 256 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 GNB4Q9HAV0 340 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 GTF2A1LQ9UNN4 478 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 SAMHD1Q9Y3Z3 626 aaKnown RBP9.73□□□□□ -0.85
PSEN1-221ENST00000557293 R4GMQ9 66 aa9.73□□□□□ -0.85
PSEN1-221ENST00000557293 IGKV1-9A0A0C4DH69 117 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 IGKV1-12A0A0C4DH73 117 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 KBTBD11-OT1A0A1B0GTJ5 212 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 MAGEA13PA6NCF6 341 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 H3BSH0 61 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 LDLRAD4O15165 306 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 IGKV1D-12P01611 117 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 HMGN1P05114 100 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 PRKACAP17612 351 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 ATP6V1B2P21281 511 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 NFYBP25208 207 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 PRDX6P30041 224 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 PTGFRP43088 359 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 RPS7P62081 194 aaKnown RBP9.72□□□□□ -0.85
PSEN1-221ENST00000557293 RUNX1Q01196 453 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 SPIN3Q5JUX0 258 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 FAM27D1Q5T7N8 215 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 BCL2L15Q5TBC7 163 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 TMEM236Q5W0B7 351 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 CYP2R1Q6VVX0 501 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 TMEM179BQ7Z7N9 219 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 Q8IYB0 196 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 OR8H3Q8N146 312 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 ZNF491Q8N8L2 437 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 OR1N2Q8NGR9 330 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 CMTM5Q96DZ9 223 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 HRASLS5Q96KN8 279 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 HSPB9Q9BQS6 159 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 PPIL3Q9H2H8 161 aaKnown RBP9.72□□□□□ -0.85
PSEN1-221ENST00000557293 LINC00574Q9H8X3 128 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 LIN7CQ9NUP9 197 aaKnown RBP9.72□□□□□ -0.85
PSEN1-221ENST00000557293 MRM2Q9UI43 246 aaKnown RBP9.72□□□□□ -0.85
PSEN1-221ENST00000557293 IKZF2Q9UKS7 526 aa9.72□□□□□ -0.85
PSEN1-221ENST00000557293 FUOMA2VDF0 154 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 SH2D1BO14796 132 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 CSN2P05814 226 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 RAB7AP51149 207 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 GNB1P62873 340 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 ZNF322Q6U7Q0 402 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-221ENST00000557293 GIPC3Q8TF64 312 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 DLX4Q92988 240 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-221ENST00000557293 BORCS8Q96FH0 119 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 GON7Q9BXV9 100 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 CHST5Q9GZS9 411 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 COMMD4Q9H0A8 199 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 MOB1AQ9H8S9 216 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 REEP1Q9H902 201 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 EXOSC4Q9NPD3 245 aaKnown RBP9.71□□□□□ -0.86
PSEN1-221ENST00000557293 ISYNA1Q9NPH2 558 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 ING3Q9NXR8 418 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 GLS2Q9UI32 602 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 GSTK1Q9Y2Q3 226 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 SNX5Q9Y5X3 404 aa9.71□□□□□ -0.86
PSEN1-221ENST00000557293 IGHV3-72A0A0B4J1Y9 119 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 IGHV1-3A0A0C4DH29 117 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 A8MZ25 164 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 JTBO76095 146 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 IGHV4-30-4P0DP06 118 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 PPIFP30405 207 aaKnown RBP9.7□□□□□ -0.86
PSEN1-221ENST00000557293 CXCR4P61073 352 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 ZNF616Q08AN1 781 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 ZNF816Q0VGE8 651 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-221ENST00000557293 MADCAM1Q13477 382 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 ODF4Q2M2E3 257 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 KRBOX4Q5JUW0 171 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 CATSPERDQ86XM0 798 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 PGAM4Q8N0Y7 254 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 DNAAF1Q8NEP3 725 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 OR13A1Q8NGR1 328 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 HAVCR2Q8TDQ0 301 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 UBE2E2Q96LR5 201 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 KCTD7Q96MP8 289 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 OSBPL10Q9BXB5 764 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 CCDC134Q9H6E4 229 aa9.7□□□□□ -0.86
PSEN1-221ENST00000557293 AMMECR1Q9Y4X0 333 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms