RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 DUSP21Q9H596 190 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 ING3Q9NXR8 418 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 SCN3BQ9NY72 215 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 A0A1W2PP11 408 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 hADV38S2A0JD32 116 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 HSPB6O14558 160 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 CD1AP06126 327 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 IGHV1-8P0DP01 117 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-212ENST00000540230 ERP29P30040 261 aaKnown RBP12.25□□□□□ -0.45
UBE3B-212ENST00000540230 TGFBR2P37173 567 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 ATXN7L3Q14CW9 347 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-212ENST00000540230 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 OR51T1Q8NGJ9 327 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 MYDGFQ969H8 173 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 CPNE2Q96FN4 548 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-212ENST00000540230 CNBD2Q96M20 576 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 PPIL3Q9H2H8 161 aaKnown RBP12.25□□□□□ -0.45
UBE3B-212ENST00000540230 VCX3BQ9H321 246 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 HEXA-AS1Q9H8Q6 139 aa12.25□□□□□ -0.45
UBE3B-212ENST00000540230 TRRAPQ9Y4A5 3859 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 TRAV24A0A0B4J272 114 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 HAX1O00165 279 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 DEGS1O15121 323 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 GPR137BO60478 399 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 HTR3BO95264 441 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 PAHP00439 452 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 MAS1P04201 325 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 CRHBPP24387 322 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 GP2P55259 537 aaKnown RBP12.24□□□□□ -0.45
UBE3B-212ENST00000540230 BDH1Q02338 343 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 FOXL1Q12952 345 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 RSU1Q15404 277 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 SPHARQ15513 63 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 MED22Q15528 200 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 MIDNQ504T8 468 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 FAM27D1Q5T7N8 215 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 DYNAPQ8N1N2 210 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 PPP1R35Q8TAP8 253 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 C1RLQ9NZP8 487 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 ING4Q9UNL4 249 aa12.24□□□□□ -0.45
UBE3B-212ENST00000540230 hCG_1809904A0A1W2PP81 198 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 A0A1W2PPE2 198 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 A0A1W2PR64 198 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 A0A1W2PRV1 198 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 ODF3BA8MYP8 253 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 RBP4P02753 201 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 CSN2P05814 226 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 SERPINA2P20848 420 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 GDNFP39905 211 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 IL13RA2Q14627 380 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 TRAPPC6BQ86SZ2 158 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 LYPD6Q86Y78 171 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 C3orf56Q8N813 242 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 CHST4Q8NCG5 386 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 BEND2Q8NDZ0 799 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 TMED9Q9BVK6 235 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 IL36GQ9NZH8 169 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 TPRKBQ9Y3C4 175 aa12.23□□□□□ -0.45
UBE3B-212ENST00000540230 ODAMA1E959 279 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 RGS10O43665 173 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 CLPXO76031 633 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 KRBOX4Q5JUW0 171 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 PRAMEF5Q5TYX0 476 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 JAGN1Q8N5M9 183 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 PLPPR1Q8TBJ4 325 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 DYRK2Q92630 601 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 MUL1Q969V5 352 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 METTL9Q9H1A3 318 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 DPAGT1Q9H3H5 408 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 CKLFQ9UBR5 152 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 FOXJ3Q9UPW0 622 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 ST3GAL6Q9Y274 331 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 FBN3Q75N90 2809 aa12.22□□□□□ -0.45
UBE3B-212ENST00000540230 FAM172BPA6NC97 362 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 FAM90A8PA6NJQ4 464 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 H3BUX3 64 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 GEMIN2O14893 280 aaKnown RBP12.21□□□□□ -0.45
UBE3B-212ENST00000540230 ARG1P05089 322 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 MAP2K4P45985 399 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 HSPA13P48723 471 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 RBM11P57052 281 aaKnown RBP12.21□□□□□ -0.45
UBE3B-212ENST00000540230 SLC22A6Q4U2R8 563 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 ACSM3Q53FZ2 586 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 PAN3Q58A45 887 aaKnown RBP12.21□□□□□ -0.45
UBE3B-212ENST00000540230 UTF1Q5T230 341 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 LIPKQ5VXJ0 399 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 ZNF626Q68DY1 528 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 UNQ9370/PRO34162Q6UXP9 181 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 OSR2Q8N2R0 312 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 OR11H6Q8NGC7 330 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 OR4D6Q8NGJ1 314 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 OR13D1Q8NGV5 346 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 CYYR1Q96J86 154 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 SSX3Q99909 188 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 CCDC90BQ9GZT6 254 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 MEGF9Q9H1U4 602 aa12.21□□□□□ -0.45
UBE3B-212ENST00000540230 VPREB3Q9UKI3 123 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms