RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 NDUFB11Q9NX14 153 aa8.68□□□□□ -1.02
SSBP1-210ENST00000481508 IL36GQ9NZH8 169 aa8.68□□□□□ -1.02
SSBP1-210ENST00000481508 CKLFQ9UBR5 152 aa8.68□□□□□ -1.02
SSBP1-210ENST00000481508 MRPS28Q9Y2Q9 187 aaKnown RBP8.68□□□□□ -1.02
SSBP1-210ENST00000481508 TRAV24A0A0B4J272 114 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 A0A0G2JK05 382 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 CENPVL3A0A0U1RRI6 287 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 A0A1W2PQ09 198 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 RNASEK-C17orf49H0YIS7 233 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 HSPB6O14558 160 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 VENTXO95231 258 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 LIPFP07098 398 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 CD37P11049 281 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 ZNF44P15621 663 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 SRMP19623 302 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 GABRR1P24046 479 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 DLX6P56179 175 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 EDDM3BP56851 147 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 RBM11P57052 281 aaKnown RBP8.67□□□□□ -1.02
SSBP1-210ENST00000481508 RPL31P62899 125 aaKnown RBP8.67□□□□□ -1.02
SSBP1-210ENST00000481508 GRK1Q15835 563 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 NEDD8Q15843 81 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 C11orf91Q3C1V1 193 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 SLC22A6Q4U2R8 563 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 CD200R1LQ6Q8B3 271 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 TMEM104Q8NE00 496 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 OR51T1Q8NGJ9 327 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 TNFRSF14Q92956 283 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 LHX4Q969G2 390 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 COQ2Q96H96 371 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 METTL9Q9H1A3 318 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 BANF2Q9H503 90 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 TCF7L1Q9HCS4 588 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 NUP50Q9UKX7 468 aa8.67□□□□□ -1.02
SSBP1-210ENST00000481508 TRBV23-1A0A0A0MS06 115 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 A0A1W2PRD5 423 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 A0A1W2PRF3 423 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 A0A1W2PRM7 423 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 SH2D1BO14796 132 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 GEMIN2O14893 280 aaKnown RBP8.66□□□□□ -1.02
SSBP1-210ENST00000481508 LMO1P25800 156 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 CALRP27797 417 aaKnown RBP8.66□□□□□ -1.02
SSBP1-210ENST00000481508 OR10A3P58181 314 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 ATXN7L3Q14CW9 347 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-210ENST00000481508 C1orf100Q5SVJ3 147 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 METTL11BQ5VVY1 283 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 AWAT2Q6E213 333 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 C22orf42Q6IC83 251 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 OR10K2Q6IF99 312 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 FIP1L1Q6UN15 594 aaKnown RBP8.66□□□□□ -1.02
SSBP1-210ENST00000481508 RTN4RL2Q86UN3 420 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 OSR2Q8N2R0 312 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 BPIFB2Q8N4F0 458 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 KIR3DL3Q8N743 410 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 NKAIN3Q8N8D7 197 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 PLPPR1Q8TBJ4 325 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 PHYHIPQ92561 330 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 THRSPQ92748 146 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 SLC25A28Q96A46 364 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 CPNE2Q96FN4 548 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-210ENST00000481508 RNF167Q9H6Y7 350 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 RHOFQ9HBH0 211 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 ESM1Q9NQ30 184 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 ING3Q9NXR8 418 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 ST3GAL6Q9Y274 331 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 AK6Q9Y3D8 172 aaKnown RBP8.66□□□□□ -1.02
SSBP1-210ENST00000481508 KPTNQ9Y664 436 aa8.66□□□□□ -1.02
SSBP1-210ENST00000481508 TRDV1A0A1B0GX56 115 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 SMIM30A4D0T7 59 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 CCRL2O00421 344 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 DEGS1O15121 323 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 MMP23AO75900 390 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 SMIM18P0DKX4 95 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 PSMA1P25786 263 aaKnown RBP8.65□□□□□ -1.02
SSBP1-210ENST00000481508 GLIPR1P48060 266 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 P2RX3P56373 397 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 RELBQ01201 579 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 AESQ08117 197 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 PLA2G7Q13093 441 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 UNC119Q13432 240 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 IL13RA2Q14627 380 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 P2RY14Q15391 338 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 TRAM1Q15629 374 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 NHLRC3Q5JS37 347 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 UTF1Q5T230 341 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 SYT6Q5T7P8 510 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-210ENST00000481508 BAIAP2L2Q6UXY1 529 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 GDPD3Q7L5L3 318 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 NR2C2APQ86WQ0 139 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 CDH26Q8IXH8 852 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 SIGLECL1Q8N7X8 197 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 TBC1D15Q8TC07 691 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 FCGR1BQ92637 280 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 FAM46BQ96A09 425 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 UQCC2Q9BRT2 126 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 OR51E2Q9H255 320 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 ZNF696Q9H7X3 374 aa8.65□□□□□ -1.02
SSBP1-210ENST00000481508 TRAV39A0A0B4J263 110 aa8.64□□□□□ -1.03
SSBP1-210ENST00000481508 IGHV1-69DA0A0B4J2H0 117 aa8.64□□□□□ -1.03
SSBP1-210ENST00000481508 MEGF11A6BM72 1044 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms