RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PRB1P04280 392 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 TNFRSF1AP19438 455 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 LOXP28300 417 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-210ENST00000475329 ARPC4P59998 168 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 ZNF672Q499Z4 452 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-210ENST00000475329 SCGB2B2Q4G0G5 96 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 SPRNQ5BIV9 151 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 IDO2Q6ZQW0 420 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 FAM90A1Q86YD7 464 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 ZNF843Q8N446 348 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 ARRDC1Q8N5I2 433 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 OR5AP2Q8NGF4 316 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 OR11L1Q8NGX0 322 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 Q8TCH9 128 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 RDH5Q92781 318 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 SLC25A21Q9BQT8 299 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-210ENST00000475329 EGLN1Q9GZT9 426 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 WDR13Q9H1Z4 485 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 RIMS4Q9H426 269 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-210ENST00000475329 ETAA1Q9NY74 926 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 CISD1Q9NZ45 108 aaKnown RBP11.58□□□□□ -0.56
TRAF4-210ENST00000475329 OR14J1Q9UGF5 321 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 ICE1Q9Y2F5 2266 aa11.58□□□□□ -0.56
TRAF4-210ENST00000475329 ARFGEF3Q5TH69 2177 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 B9A039 149 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 SLC33A1O00400 549 aaPredicted RBP11.57□□□□□ -0.56
TRAF4-210ENST00000475329 PRAF2O60831 178 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 NAPSAO96009 420 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 EGR1P18146 543 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 CDK10Q15131 360 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 CARTPTQ16568 116 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 SRSF7Q16629 238 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAF4-210ENST00000475329 FAM209AQ5JX71 171 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 SHEQ5VZ18 495 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 TMEM17Q86X19 198 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 CHAC2Q8WUX2 184 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 GIMAP1Q8WWP7 306 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 PPA2Q9H2U2 334 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 GCM1Q9NP62 436 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 EHFQ9NZC4 300 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 RNF7Q9UBF6 113 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 ANXA10Q9UJ72 324 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 FLVCR2Q9UPI3 526 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 NPTNQ9Y639 398 aa11.57□□□□□ -0.56
TRAF4-210ENST00000475329 ANKHD1Q8IWZ3 2542 aaKnown RBP11.57□□□□□ -0.56
TRAF4-210ENST00000475329 IGKV1D-8A0A087WSZ0 117 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 C7orf66A4D0T2 115 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 PYCARD-AS1I3L0S3 204 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 IFNL4K9M1U5 179 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 RLN1P04808 185 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 IRF2P14316 349 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 CEBPDP49716 269 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-210ENST00000475329 MECP2P51608 486 aaKnown RBP11.56□□□□□ -0.56
TRAF4-210ENST00000475329 TSPAN5P62079 268 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 Q6ZS49 121 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 GCSAMQ8N6F7 178 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 BOLLQ8N9W6 283 aaKnown RBP11.56□□□□□ -0.56
TRAF4-210ENST00000475329 OR13C8Q8NGS7 320 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 LILRB1Q8NHL6 650 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-210ENST00000475329 FAM222BQ8WU58 562 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 HPS1Q92902 700 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 MS4A5Q9H3V2 200 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 DECR2Q9NUI1 292 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 NECAP2Q9NVZ3 263 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 TREM2Q9NZC2 230 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 DNAJB11Q9UBS4 358 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 WIPI2Q9Y4P8 454 aa11.56□□□□□ -0.56
TRAF4-210ENST00000475329 BAHCC1Q9P281 2608 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 TRBV6-6A0A0A6YYG2 114 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 POM121CA8CG34 1229 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-210ENST00000475329 H7C1Q1 480 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 LHBP01229 141 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 TRAPPC2P0DI81 140 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 TRAPPC2BP0DI82 140 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 LMO1P25800 156 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 SNRPD2P62316 118 aaKnown RBP11.55□□□□□ -0.56
TRAF4-210ENST00000475329 CCL8P80075 99 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 GRK1Q15835 563 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 MOB1BQ7L9L4 216 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 ZDHHC22Q8N966 263 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 MRPL30Q8TCC3 161 aaKnown RBP11.55□□□□□ -0.56
TRAF4-210ENST00000475329 DACT3Q96B18 629 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-210ENST00000475329 PPP1R14BQ96C90 147 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 SAP30LQ9HAJ7 183 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-210ENST00000475329 TMEM165Q9HC07 324 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 Q9N2K0 584 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 PPP1R3CQ9UQK1 317 aa11.55□□□□□ -0.56
TRAF4-210ENST00000475329 FASNP49327 2511 aaKnown RBP11.54□□□□□ -0.56
TRAF4-210ENST00000475329 A0A0A6YYJ9 748 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 KIR2DS1A0A191URI9 304 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 TMEM82A0PJX8 343 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 HMX3A6NHT5 357 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 RFPL4AA6NLU0 287 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 LRRC30A6NM36 301 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 RFPL4AL1F8VTS6 287 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 SDCBPO00560 298 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-210ENST00000475329 C1QL1O75973 258 aa11.54□□□□□ -0.56
TRAF4-210ENST00000475329 IL5P05113 134 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms