RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TMED4Q7Z7H5 227 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 MOGAT3Q86VF5 341 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 DMRTC2Q8IXT2 367 aaPredicted RBP16.02■□□□□ 0.15
SMC4-209ENST00000468653 MED30Q96HR3 178 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 CNTNAP3BQ96NU0 1288 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 SEC22CQ9BRL7 303 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 CNTNAP3Q9BZ76 1288 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 OR2AT4A6NND4 320 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 A8MV72 311 aaPredicted RBP16.01■□□□□ 0.15
SMC4-209ENST00000468653 SSNA1O43805 119 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 HPXP02790 462 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 VSIG10L2P0DP72 767 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 SERPINF1P36955 418 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 GRK1Q15835 563 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 BEX5Q5H9J7 111 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 ATPAF1Q5TC12 328 aaPredicted RBP16.01■□□□□ 0.15
SMC4-209ENST00000468653 SLC36A1Q7Z2H8 476 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 ZDHHC22Q8N966 263 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 OR10Z1Q8NGY1 313 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 OR6F1Q8NGZ6 308 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 CCDC107Q8WV48 283 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 RIMS4Q9H426 269 aaPredicted RBP16.01■□□□□ 0.15
SMC4-209ENST00000468653 NECAP2Q9NVZ3 263 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 IL19Q9UHD0 177 aa16.01■□□□□ 0.15
SMC4-209ENST00000468653 SLC33A1O00400 549 aaPredicted RBP16■□□□□ 0.15
SMC4-209ENST00000468653 NAPSAO96009 420 aa16■□□□□ 0.15
SMC4-209ENST00000468653 SPRNQ5BIV9 151 aa16■□□□□ 0.15
SMC4-209ENST00000468653 MRGPRFQ96AM1 343 aa16■□□□□ 0.15
SMC4-209ENST00000468653 ALX4Q9H161 411 aaPredicted RBP16■□□□□ 0.15
SMC4-209ENST00000468653 RASL12Q9NYN1 266 aa16■□□□□ 0.15
SMC4-209ENST00000468653 VSIG4Q9Y279 399 aa16■□□□□ 0.15
SMC4-209ENST00000468653 ICE1Q9Y2F5 2266 aa16■□□□□ 0.15
SMC4-209ENST00000468653 E7EQL1 145 aa16■□□□□ 0.15
SMC4-209ENST00000468653 KNG1P01042 644 aa16■□□□□ 0.15
SMC4-209ENST00000468653 CFHR2P36980 270 aa16■□□□□ 0.15
SMC4-209ENST00000468653 HOXA4Q00056 320 aaPredicted RBP16■□□□□ 0.15
SMC4-209ENST00000468653 CACNA1BQ00975 2339 aa16■□□□□ 0.15
SMC4-209ENST00000468653 CD83Q01151 205 aa16■□□□□ 0.15
SMC4-209ENST00000468653 TFF3Q07654 80 aa16■□□□□ 0.15
SMC4-209ENST00000468653 C4orf46Q504U0 113 aa16■□□□□ 0.15
SMC4-209ENST00000468653 CD276Q5ZPR3 534 aa16■□□□□ 0.15
SMC4-209ENST00000468653 BOLLQ8N9W6 283 aaKnown RBP16■□□□□ 0.15
SMC4-209ENST00000468653 NEUROG1Q92886 237 aa16■□□□□ 0.15
SMC4-209ENST00000468653 DIRC2Q96SL1 478 aa16■□□□□ 0.15
SMC4-209ENST00000468653 Q9N2K0 584 aa16■□□□□ 0.15
SMC4-209ENST00000468653 ZNF69Q9UC07 566 aa16■□□□□ 0.15
SMC4-209ENST00000468653 ZNF221Q9UK13 617 aa16■□□□□ 0.15
SMC4-209ENST00000468653 RNF115Q9Y4L5 304 aa16■□□□□ 0.15
SMC4-209ENST00000468653 SNRPGP15A8MWD9 76 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 CREBL2O60519 120 aaPredicted RBP15.99■□□□□ 0.15
SMC4-209ENST00000468653 ZG16O60844 167 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 OR5H8P0DN80 308 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 MDH2P40926 338 aaKnown RBP15.99■□□□□ 0.15
SMC4-209ENST00000468653 GATA4P43694 442 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 CEBPDP49716 269 aaPredicted RBP15.99■□□□□ 0.15
SMC4-209ENST00000468653 NPY4RP50391 375 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 FCN2Q15485 313 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 SRSF7Q16629 238 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMC4-209ENST00000468653 Q6ZPA2 131 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 MARCH1Q8TCQ1 289 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 ST6GAL2Q96JF0 529 aa15.99■□□□□ 0.15
SMC4-209ENST00000468653 SRRM5B3KS81 715 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 M0R233 179 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 CLDN14O95500 239 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 ZNF808Q8N4W9 903 aaPredicted RBP15.98■□□□□ 0.15
SMC4-209ENST00000468653 OR52B4Q8NGK2 314 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 CAPSLQ8WWF8 208 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 SCGB3A2Q96PL1 93 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 RANGRFQ9HD47 186 aaPredicted RBP15.98■□□□□ 0.15
SMC4-209ENST00000468653 ING3Q9NXR8 418 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 DNAJB11Q9UBS4 358 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 RFPL4AA6NLU0 287 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 C17orf100A8MU93 164 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 RFPL4AL1F8VTS6 287 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 GSTT2P0CG29 244 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 APOBEC3AP31941 199 aaPredicted RBP15.98■□□□□ 0.15
SMC4-209ENST00000468653 RBMXP38159 391 aaKnown RBP15.98■□□□□ 0.15
SMC4-209ENST00000468653 C11orf91Q3C1V1 193 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 ZNF626Q68DY1 528 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 C17orf107Q6ZR85 190 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 Q6ZS49 121 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 LHFPL1Q86WI0 220 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 MRPL30Q8TCC3 161 aaKnown RBP15.98■□□□□ 0.15
SMC4-209ENST00000468653 ZNF2Q9BSG1 426 aaPredicted RBP15.98■□□□□ 0.15
SMC4-209ENST00000468653 TMEM165Q9HC07 324 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 MYOZ1Q9NP98 299 aaPredicted RBP15.98■□□□□ 0.15
SMC4-209ENST00000468653 TREM2Q9NZC2 230 aa15.98■□□□□ 0.15
SMC4-209ENST00000468653 CHD3Q12873 2000 aaKnown RBP15.97■□□□□ 0.15
SMC4-209ENST00000468653 TRBV6-6A0A0A6YYG2 114 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 H7C1Q1 480 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 PLAUP00749 431 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 ADH4P08319 380 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 OR4E1P0C645 316 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 EGR1P18146 543 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 EIF2B2P49770 351 aaKnown RBP15.97■□□□□ 0.15
SMC4-209ENST00000468653 SHEQ5VZ18 495 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 GCSAMQ8N6F7 178 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 ITLN2Q8WWU7 325 aaPredicted RBP15.97■□□□□ 0.15
SMC4-209ENST00000468653 ERGIC1Q969X5 290 aa15.97■□□□□ 0.15
SMC4-209ENST00000468653 GCM1Q9NP62 436 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms