RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GIFP27352 417 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 CHATP28329 748 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 DUSP1P28562 367 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 GRNP28799 593 aaKnown RBP4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 RFX2P48378 723 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 EDDM3BP56851 147 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 SEC61A1P61619 476 aaKnown RBP4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 IL13RA1P78552 427 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 TLE4Q04727 773 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 CDK10Q15131 360 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 MPPED2Q15777 294 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 SRSF7Q16629 238 aaKnown RBP eCLIP4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 KRBOX4Q5JUW0 171 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 METTL11BQ5VVY1 283 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 SP5Q6BEB4 398 aaPredicted RBP4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 CCBE1Q6UXH8 406 aaPredicted RBP4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 IDO2Q6ZQW0 420 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 Q6ZR03 302 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF826PQ6ZT77 177 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 HOGA1Q86XE5 327 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 LYPD6Q86Y78 171 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 CMTM1Q8IZ96 169 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 BATF2Q8N1L9 274 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 TMEM185AQ8NFB2 350 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 Q8NFD4 153 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR56B4Q8NH76 319 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 Q8TCH9 128 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 NUDCD2Q8WVJ2 157 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 YIPF5Q969M3 257 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 KIRREL1Q96J84 757 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 FAM234AQ9H0X4 552 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 IFT22Q9H7X7 185 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 SEBOXQ9HB31 216 aaPredicted RBP4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 HRASLSQ9HDD0 168 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 GCM1Q9NP62 436 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 TMEM106BQ9NUM4 274 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR6C3Q9NZP0 311 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 AK3Q9UIJ7 227 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 AKAP13Q12802 2813 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 SPTA1P02549 2419 aa4.94□□□□□ -1.62
RNU1-88P-201ENST00000459274 TANC2Q9HCD6 1990 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 hCG_2014768A0A024R1R8 64 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 IGKV1-12A0A0C4DH73 117 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 TEX13DA0A0J9YY54 714 aaPredicted RBP4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 A0A1B0GWJ7 208 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 hADV38S2A0JD32 116 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 MEIOCA2RUB1 952 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 DEFB108AA8MXU0 73 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 TRDCB7Z8K6 153 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 C3orf80F5H4A9 247 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 LGALS8O00214 317 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 MFNGO00587 321 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 GPR37O15354 613 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 TMPRSS2O15393 492 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 PPIHO43447 177 aaKnown RBP4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 SSNA1O43805 119 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 SLC22A5O76082 557 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 IGKV1D-12P01611 117 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 PMP2P02689 132 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR5H8P0DN80 308 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 NDUFB7P17568 137 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZBTB25P24278 435 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 LMO1P25800 156 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 HRH1P35367 487 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 RAG2P55895 527 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 TMEM33P57088 247 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 ERVK11-1P61568 191 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 MRPS11P82912 194 aaKnown RBP4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 GUCA2AQ02747 115 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 COL10A1Q03692 680 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 TFF3Q07654 80 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 CBX3Q13185 183 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 PDCD1Q15116 288 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 MOGAT2Q3SYC2 334 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 C4orf46Q504U0 113 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 PLAC9Q5JTB6 97 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 PRR14LQ5THK1 2151 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 SLC35E4Q6ICL7 350 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 DCDC5Q6ZRR9 648 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 C22orf34Q6ZV56 151 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 BTN2A1Q7KYR7 527 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 NRARPQ7Z6K4 114 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF554Q86TJ5 538 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 PRR18Q8N4B5 295 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 SPICQ8N5J4 248 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 CCDC71LQ8N9Z2 235 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 DUSP18Q8NEJ0 188 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 DEFB108BQ8NET1 73 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR51S1Q8NGJ8 323 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 OR4A4PQ8NGN8 299 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 TERB2Q8NHR7 220 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 IL1F10Q8WWZ1 152 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 H1FXQ92522 213 aaKnown RBP4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 ZNF488Q96MN9 340 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 CCL19Q99731 98 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 C11orf54Q9H0W9 315 aaPredicted RBP4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 MED28Q9H204 178 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 GAL3ST2Q9H3Q3 398 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 TMEM165Q9HC07 324 aa4.93□□□□□ -1.62
RNU1-88P-201ENST00000459274 NUDT15Q9NV35 164 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms