RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MRGPRX3Q96LB0 322 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 LINC00052Q96N35 136 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 TECRQ9NZ01 308 aaKnown RBP16.23■□□□□ 0.19
SHANK1-202ENST00000359082 GNG7O60262 68 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 ADAP1O75689 374 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 SLC25A30Q5SVS4 291 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 LRP11Q86VZ4 500 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 WDR13Q9H1Z4 485 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 ZNF385DQ9H6B1 395 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 GEMIN2O14893 280 aaKnown RBP16.23■□□□□ 0.19
SHANK1-202ENST00000359082 PMELP40967 661 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 CBLN3Q6UW01 205 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 LY86O95711 162 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 SCGB1D4Q6XE38 83 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 SHROOM3Q8TF72 1996 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 SULT1A2P50226 295 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 OR10AC1Q8NH08 325 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 SSMEM1Q8WWF3 244 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 POM121Q96HA1 1249 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 TMEM140Q9NV12 185 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 CDK2AP1O14519 115 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 HLA-GP17693 338 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 LYRM7Q5U5X0 104 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 ECM29Q5VYK3 1845 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 C11orf94C9JXX5 98 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 WDFY2Q96P53 400 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 NPAS1Q99742 590 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 MAP1LC3CQ9BXW4 147 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 PCED1AQ9H1Q7 454 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 P01737 135 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 CST2P09228 141 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 CISD3P0C7P0 127 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 GABRA1P14867 456 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 SKP2Q13309 424 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 D2HGDHQ8N465 521 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 Q9N2K0 584 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 TMEM167BQ9NRX6 74 aa16.22■□□□□ 0.19
SHANK1-202ENST00000359082 SLC23A3Q6PIS1 610 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 GPX7Q96SL4 187 aaPredicted RBP16.21■□□□□ 0.19
SHANK1-202ENST00000359082 MRM2Q9UI43 246 aaKnown RBP16.21■□□□□ 0.19
SHANK1-202ENST00000359082 OR5B21A6NL26 309 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 ZNF547Q8IVP9 402 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 MSRB3Q8IXL7 192 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 CDC42EP2O14613 210 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 SEMA7AO75326 666 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 YBX2Q9Y2T7 364 aaKnown RBP16.21■□□□□ 0.19
SHANK1-202ENST00000359082 MEOX2P50222 304 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 HERVK_113P61574 105 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 IL24Q13007 206 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 HLA-DRB5Q30154 266 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 MESTQ5EB52 335 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 GABRG3Q99928 467 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 LHX9Q9NQ69 397 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 BET1LQ9NYM9 111 aa16.21■□□□□ 0.19
SHANK1-202ENST00000359082 SOCS1O15524 211 aa16.21■□□□□ 0.18
SHANK1-202ENST00000359082 P2RY1P47900 373 aa16.21■□□□□ 0.18
SHANK1-202ENST00000359082 NCMAPQ5T1S8 102 aa16.21■□□□□ 0.18
SHANK1-202ENST00000359082 ZNF770Q6IQ21 691 aaPredicted RBP16.21■□□□□ 0.18
SHANK1-202ENST00000359082 NRTNQ99748 197 aa16.21■□□□□ 0.18
SHANK1-202ENST00000359082 CYB5R1Q9UHQ9 305 aa16.21■□□□□ 0.18
SHANK1-202ENST00000359082 IGHV3-21A0A0B4J1V1 117 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 GALP22466 123 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 CHST1O43916 411 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 NTN1O95631 604 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 EPHA8P29322 1005 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-202ENST00000359082 GAPTQ8N292 157 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 VSTM2LQ96N03 204 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 MPC1Q9Y5U8 109 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 TAF1P21675 1872 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 MFNGO00587 321 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 ARG1P05089 322 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 C21orf58P58505 322 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 OR6X1Q8NH79 312 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 AUP1Q9Y679 476 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 KCNMB2Q9Y691 235 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 PTPMT1Q8WUK0 201 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-202ENST00000359082 ANAPC16Q96DE5 110 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 LPAR5Q9H1C0 372 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 WNT16Q9UBV4 365 aa16.2■□□□□ 0.18
SHANK1-202ENST00000359082 CTSDP07339 412 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-202ENST00000359082 BRS3P32247 399 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 C10orf113Q5VZT2 155 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 DEGS2Q6QHC5 323 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 CLEC18BQ6UXF7 455 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 CDRT15L2A8MXV6 281 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 SRSF10O75494 262 aaKnown RBP16.19■□□□□ 0.18
SHANK1-202ENST00000359082 NXPH1P58417 271 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 DYRK2Q92630 601 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 MBPP02686 304 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-202ENST00000359082 DOCK2Q92608 1830 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 TCTAP57738 103 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 KIAA0040Q15053 153 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 MPV17LQ2QL34 196 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 SLC16A13Q7RTY0 426 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 DYNLRB2Q8TF09 96 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 ADTRPQ96IZ2 230 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-202ENST00000359082 IGLV3-16A0A075B6K0 115 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 CDIPTO14735 213 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 TBX19O60806 448 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms