RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 TAS2R3Q9NYW6 316 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 PRB2P02812 416 aaPredicted RBP20.2■□□□□ 0.82
U2AF1-201ENST00000291552 ZNF44P15621 663 aa20.2■□□□□ 0.82
U2AF1-201ENST00000291552 CD34P28906 385 aa20.2■□□□□ 0.82
U2AF1-201ENST00000291552 SCN1BQ07699 218 aa20.2■□□□□ 0.82
U2AF1-201ENST00000291552 ATXN7L3Q14CW9 347 aaPredicted RBP20.2■□□□□ 0.82
U2AF1-201ENST00000291552 NDUFA11Q86Y39 141 aa20.2■□□□□ 0.82
U2AF1-201ENST00000291552 PARP16Q8N5Y8 322 aa20.2■□□□□ 0.82
U2AF1-201ENST00000291552 RGP1Q92546 391 aaPredicted RBP20.2■□□□□ 0.82
U2AF1-201ENST00000291552 PPIL3Q9H2H8 161 aaKnown RBP20.2■□□□□ 0.82
U2AF1-201ENST00000291552 RHOFQ9HBH0 211 aa20.2■□□□□ 0.82
U2AF1-201ENST00000291552 DPM3Q9P2X0 92 aa20.2■□□□□ 0.82
U2AF1-201ENST00000291552 SNTNA6NMZ2 147 aa20.19■□□□□ 0.82
U2AF1-201ENST00000291552 SULT1B1O43704 296 aa20.19■□□□□ 0.82
U2AF1-201ENST00000291552 ALX3O95076 343 aa20.19■□□□□ 0.82
U2AF1-201ENST00000291552 VDAC2P45880 294 aaPredicted RBP20.19■□□□□ 0.82
U2AF1-201ENST00000291552 KISS1Q15726 138 aa20.19■□□□□ 0.82
U2AF1-201ENST00000291552 APH1BQ8WW43 257 aa20.19■□□□□ 0.82
U2AF1-201ENST00000291552 ING3Q9NXR8 418 aa20.19■□□□□ 0.82
U2AF1-201ENST00000291552 TMEM212A6NML5 194 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 HCKP08631 526 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 C17orf58Q2M2W7 97 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 KRBOX4Q5JUW0 171 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 ZNF691Q5VV52 312 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 LPCAT4Q643R3 524 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 OR52W1Q6IF63 320 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 RTN4RL2Q86UN3 420 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 CHST4Q8NCG5 386 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 OR52I1Q8NGK6 324 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 MRPL48Q96GC5 212 aaKnown RBP20.18■□□□□ 0.82
U2AF1-201ENST00000291552 PCDHGB5Q9Y5G0 923 aa20.18■□□□□ 0.82
U2AF1-201ENST00000291552 FUOMA2VDF0 154 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 TMEM225BP0DP42 221 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 PTGFRP43088 359 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 RAB40BQ12829 278 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 HLA-DRB5Q30154 266 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 ZNF529Q6P280 563 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 OR51A2Q8NGJ7 313 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 ZNF596Q8TC21 504 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 C9orf16Q9BUW7 83 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 INPP5EQ9NRR6 644 aa20.17■□□□□ 0.82
U2AF1-201ENST00000291552 LY6LH3BQJ8 138 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 FADS2O95864 444 aaKnown RBP20.16■□□□□ 0.82
U2AF1-201ENST00000291552 LIMS3P0CW19 117 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 LIMS4P0CW20 117 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 CGB3P0DN86 165 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 CGB7P0DN87 165 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 OXLD1Q5BKU9 147 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 ARSJQ5FYB0 599 aaPredicted RBP20.16■□□□□ 0.82
U2AF1-201ENST00000291552 SERPINA12Q8IW75 414 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 OR5AK2Q8NH90 309 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 R3HDM4Q96D70 268 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 MRPS18AQ9NVS2 196 aaKnown RBP20.16■□□□□ 0.82
U2AF1-201ENST00000291552 DHDHQ9UQ10 334 aa20.16■□□□□ 0.82
U2AF1-201ENST00000291552 A0A087X0M5 115 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 A0A1B0GX30 115 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 DEGS1O15121 323 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 MPZL2O60487 215 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 MTNR1BP49286 362 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 GTF2A1P52655 376 aaPredicted RBP20.15■□□□□ 0.82
U2AF1-201ENST00000291552 ZSCAN26Q16670 478 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 TPTE2P1Q5T6R2 138 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 ELP2Q6IA86 826 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 C16orf82Q7Z2V1 217 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 OR51T1Q8NGJ9 327 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 OR5D14Q8NGL3 314 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 TSEN15Q8WW01 171 aaKnown RBP20.15■□□□□ 0.82
U2AF1-201ENST00000291552 KIRREL1Q96J84 757 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 LIN7BQ9HAP6 207 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 S100A14Q9HCY8 104 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 FAM118AQ9NWS6 357 aa20.15■□□□□ 0.82
U2AF1-201ENST00000291552 TRAV24A0A0B4J272 114 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 LOC100130705A0A1B0GUX0 176 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 ZNF729A6NN14 1252 aaPredicted RBP20.14■□□□□ 0.81
U2AF1-201ENST00000291552 GABRPO00591 440 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 HSPB6O14558 160 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 PEX14O75381 377 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 AMY1AP04745 511 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 AMY2AP04746 511 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 CCDC159P0C7I6 412 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 EMX1Q04741 257 aaPredicted RBP20.14■□□□□ 0.81
U2AF1-201ENST00000291552 SMN1Q16637 294 aaKnown RBP20.14■□□□□ 0.81
U2AF1-201ENST00000291552 TCTEX1D4Q5JR98 221 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 XAF1Q6GPH4 301 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 CCDC121Q6ZUS5 278 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 PXT1Q8NFP0 134 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 Q96MT0 163 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 SLC25A33Q9BSK2 321 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 ZNF581Q9P0T4 197 aa20.14■□□□□ 0.81
U2AF1-201ENST00000291552 SH2D7A6NKC9 451 aaPredicted RBP20.13■□□□□ 0.81
U2AF1-201ENST00000291552 LEUTXA8MZ59 168 aa20.13■□□□□ 0.81
U2AF1-201ENST00000291552 H0YJX3 145 aa20.13■□□□□ 0.81
U2AF1-201ENST00000291552 BUB1B-PAK6H3BSN5 160 aa20.13■□□□□ 0.81
U2AF1-201ENST00000291552 WBP4O75554 376 aaKnown RBP20.13■□□□□ 0.81
U2AF1-201ENST00000291552 ALDOBP05062 364 aa20.13■□□□□ 0.81
U2AF1-201ENST00000291552 GBX2P52951 348 aaPredicted RBP20.13■□□□□ 0.81
U2AF1-201ENST00000291552 CD83Q01151 205 aa20.13■□□□□ 0.81
U2AF1-201ENST00000291552 MRPL28Q13084 256 aaKnown RBP20.13■□□□□ 0.81
U2AF1-201ENST00000291552 Q6ZPA2 131 aa20.13■□□□□ 0.81
U2AF1-201ENST00000291552 PQLC1Q8N2U9 271 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms