RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZNF514Q96K75 400 aaPredicted RBP1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 RILPQ96NA2 401 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 OR2A7Q96R45 310 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 DOK1Q99704 481 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 C7orf50Q9BRJ6 194 aaKnown RBP1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ANAPC13Q9BS18 74 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 SLC19A3Q9BZV2 496 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 TRIM4Q9C037 500 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 SRRQ9GZT4 340 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 HDHD2Q9H0R4 259 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 RDH14Q9HBH5 336 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 EURLQ9NYK6 297 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 RWDD2AQ9UIY3 292 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 FBXL3Q9UKT7 428 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 PAIP2BQ9ULR5 123 aaKnown RBP1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 RFNGQ9Y644 331 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF780BQ9Y6R6 833 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 DYSFO75923 2080 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 NPHP4O75161 1426 aaPredicted RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 YEATS2Q9ULM3 1422 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 C1orf232A0A0U1RR37 186 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 TMEM72A0PK05 275 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 TMEM210A6NLX4 147 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MKRN2OSH3BPM6 223 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 FABP7O15540 132 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 CXorf1O96002 111 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MAS1P04201 325 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 KRT7P08729 469 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 OR4Q2P0C623 313 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 PET100P0DJ07 73 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 IDO1P14902 403 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MUC1P15941 1255 aaPredicted RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 PVALBP20472 110 aaPredicted RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 GRPRP30550 384 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 RPA3P35244 121 aaPredicted RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 PPP1R2P41236 205 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 CBX5P45973 191 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 LGALS7P47929 136 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 ERFP50548 548 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 SLC18A1P54219 525 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 RAB14P61106 215 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 CD164Q04900 197 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MEF2CQ06413 473 aaPredicted RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 PRDX1Q06830 199 aaKnown RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 BNIP2Q12982 314 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 C16orf72Q14CZ0 275 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 ZBTB6Q15916 424 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 SSX1Q16384 188 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 BCL2A1Q16548 175 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 RGS21Q2M5E4 152 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 FBXL19-AS1Q494R0 122 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 COX19Q49B96 90 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 UBE2NLQ5JXB2 153 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 SAPCD1Q5SSQ6 148 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 CLVS2Q5SYC1 327 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 NXNL2Q5VZ03 156 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 KCTD16Q68DU8 428 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 PPP1R2P3Q6NXS1 205 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 PP632Q6XCG6 107 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 FAM231DQ6ZW35 169 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 GALNT10Q86SR1 603 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 TMEM25Q86YD3 366 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 PLCZ1Q86YW0 608 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 FUNDC1Q8IVP5 155 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 LRRC34Q8IZ02 419 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 SPICQ8N5J4 248 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF738Q8NE65 137 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 OR7G1Q8NGA0 311 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 FAM57AQ8TBR7 257 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 TEX47Q8TBZ9 253 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 ORAOV1Q8WV07 137 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 TWIST2Q8WVJ9 160 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 DNAJB3Q8WWF6 145 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MRPL48Q96GC5 212 aaKnown RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 SMARCD1Q96GM5 515 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 CEP19Q96LK0 163 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 TMEM56Q96MV1 263 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 C9orf16Q9BUW7 83 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MS4A8Q9BY19 250 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 ANGPTL4Q9BY76 406 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 ING2Q9H160 280 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 OR52A5Q9H2C5 316 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 DSN1Q9H410 356 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MRPL40Q9NQ50 206 aaKnown RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 NKIRAS1Q9NYS0 192 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 SLC22A14Q9Y267 594 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 BTRCQ9Y297 605 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 MYO10Q9HD67 2058 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 LRPPRCP42704 1394 aaKnown RBP1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 SCN1AP35498 2009 aa1.93□□□□□ -2.1
SHCBP1-202ENST00000563219 IGHV1-3A0A0C4DH29 117 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 A0A1B0GX12 115 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 A0A1B0GXF2 115 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 FABP12A6NFH5 140 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 OR2AT4A6NND4 320 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 COLCA2A8K830 154 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF850A8MQ14 1090 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 RGS5O15539 181 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 AQP9O43315 295 aa1.92□□□□□ -2.1
SHCBP1-202ENST00000563219 ENTPD6O75354 484 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms