RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	OR5L1	Q8NGL2	311 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GPER1	Q99527	375 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CENPM	Q9NSP4	180 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SOCS1	O15524	211 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	NDUFB8	O95169	186 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GZMH	P20718	246 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FGF8	P55075	233 aa	Predicted RBP	13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	KRTDAP	P60985	99 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SUMO1	P63165	101 aa	Known RBP	13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	UNC119	Q13432	240 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	EXOSC7	Q15024	291 aa	Known RBP	13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SLC18B1	Q6NT16	456 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZAR1	Q86SH2	424 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CALHM1	Q8IU99	346 aa		13.09	□□□□□ -0.31
PAPOLA-223	ENST00000557320	C11orf98	E9PRG8	122 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320		K7ESF4	209 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	P2RY10	O00398	339 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PPBP	P02775	128 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF43	P17038	809 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	EMD	P50402	254 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	RTP5	Q14D33	572 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF665	Q9H7R5	613 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320		Q9N2K0	584 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PRSS50	Q9UI38	385 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HS3ST2	Q9Y278	367 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TRAPPC1	Q9Y5R8	145 aa		13.08	□□□□□ -0.31
PAPOLA-223	ENST00000557320	DOCK11	Q5JSL3	2073 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	NTSR1	P30989	418 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	TMEM241	Q24JQ0	296 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	BSX	Q3C1V8	233 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	VAX1	Q5SQQ9	334 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	C1orf210	Q8IVY1	113 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	LYRM2	Q9NU23	88 aa	Predicted RBP	13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	C4orf51	C9J302	202 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	PRR27	Q6MZM9	219 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	LYZL2	Q7Z4W2	148 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ADAMTS18	Q8TE60	1221 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	BCL2L2	Q92843	193 aa	Predicted RBP	13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	FAM103A1	Q9BTL3	118 aa	Known RBP	13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	OR51I2	Q9H344	312 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ZNF319	Q9P2F9	582 aa		13.08	□□□□□ -0.32
PAPOLA-223	ENST00000557320		A0A0U1RQK1	487 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ZNF20	P17024	532 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	SEC13	P55735	322 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	OCIAD2	Q56VL3	154 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	FAM90A2P	Q658T7	463 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	OTOS	Q8NHW6	89 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ZNF845	Q96IR2	970 aa	Predicted RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ZNF681	Q96N22	645 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	LMF2	Q9BU23	707 aa	Known RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	BET1L	Q9NYM9	111 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320		A0A1W2PQF6	199 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	GRIFIN	A4D1Z8	144 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ZNF217	O75362	1048 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ONECUT2	O95948	504 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	BCL6	P41182	706 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	TPPP2	P59282	170 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	FXYD4	P59646	89 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	TSPO2	Q5TGU0	170 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	AGBL4	Q5VU57	503 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	CDCP2	Q5VXM1	449 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	MEX3B	Q6ZN04	569 aa	Known RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	RAB42	Q8N4Z0	105 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	GPR84	Q9NQS5	396 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	OR6C3	Q9NZP0	311 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	WIPI2	Q9Y4P8	454 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	EML5	Q05BV3	1969 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320		A0A0U1RQV5	110 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	HLA-H	P01893	362 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	PFN1	P07737	140 aa	Known RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	DBH	P09172	617 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	PLAUR	Q03405	335 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	OR5C1	Q8NGR4	320 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	KTI12	Q96EK9	354 aa	Predicted RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	SCARF2	Q96GP6	870 aa	Predicted RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	LOXL4	Q96JB6	756 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	AICDA	Q9GZX7	198 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ELL3	Q9HB65	397 aa	Predicted RBP	13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	TUBD1	Q9UJT1	453 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320	CES1P1	Q9UKY3	287 aa		13.07	□□□□□ -0.32
PAPOLA-223	ENST00000557320		K7ERU9	68 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320		K7ESM1	405 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	RPS4Y1	P22090	263 aa	Known RBP	13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	FOXF1	Q12946	379 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	DMRTC1	Q5HYR2	192 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ZNF787	Q6DD87	383 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	OR2C3	Q8N628	320 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	ARHGAP5-AS1	Q96IT6	56 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	CYYR1	Q96J86	154 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	MAGT1	Q9H0U3	335 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	LPAR5	Q9H1C0	372 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	RHBDD3	Q9Y3P4	386 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	LOC102723971	A0A1B0GUV8	181 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	NUPR1	O60356	82 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	CXCL12	P48061	93 aa		13.06	□□□□□ -0.32
PAPOLA-223	ENST00000557320	PDLIM4	P50479	330 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms