RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 MS4A15Q8N5U1 240 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 OR4S1Q8NGB4 309 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 OR5D18Q8NGL1 313 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 H1FXQ92522 213 aaKnown RBP11.21□□□□□ -0.61
CD9-208ENST00000538834 LHX4Q969G2 390 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 OR14A2Q96R54 314 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 MS4A7Q9GZW8 240 aaPredicted RBP11.21□□□□□ -0.61
CD9-208ENST00000538834 NCOR1P1Q9H4R4 102 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 IFT22Q9H7X7 185 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 NOX4Q9NPH5 578 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 SF3B6Q9Y3B4 125 aaKnown RBP11.21□□□□□ -0.61
CD9-208ENST00000538834 A0A0G2JK05 382 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 MGST3O14880 152 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 OR2H2O95918 312 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 HCKP08631 526 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 CGB3P0DN86 165 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 CGB7P0DN87 165 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 DUSP1P28562 367 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 TGFBR2P37173 567 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 BMXP51813 675 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 UBE2E1P51965 193 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 DLX1P56177 255 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 SLC9A3R2Q15599 337 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
CD9-208ENST00000538834 CHST4Q8NCG5 386 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 CORO2AQ92828 525 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 ZMAT3Q9HA38 289 aaKnown RBP11.2□□□□□ -0.62
CD9-208ENST00000538834 ONECUT1Q9UBC0 465 aa11.2□□□□□ -0.62
CD9-208ENST00000538834 MDFIC2A0A1B0GVS7 189 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 DNAJC9-AS1A6NH13 148 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 TRIM77I1YAP6 450 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 SLC33A1O00400 549 aaPredicted RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 SH2D1BO14796 132 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 RGS10O43665 173 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 MRPS14O60783 128 aaKnown RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 INMTO95050 263 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 RNASE1P07998 156 aaKnown RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 TMEM225BP0DP42 221 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 CALCBP10092 127 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 ZNF93P35789 620 aaPredicted RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 OR3A4PP47883 348 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 GUCA2AQ02747 115 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 IL13RA2Q14627 380 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 TMEM91Q6ZNR0 172 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 TMEM86BQ8N661 226 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 OR4M1Q8NGD0 313 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 THRSPQ92748 146 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 CPNE2Q96FN4 548 aaPredicted RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 ZNF184Q99676 751 aaPredicted RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 PPIL3Q9H2H8 161 aaKnown RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 RRP15Q9Y3B9 282 aaKnown RBP11.19□□□□□ -0.62
CD9-208ENST00000538834 LINC00312Q9Y6C7 94 aa11.19□□□□□ -0.62
CD9-208ENST00000538834 TRAV24A0A0B4J272 114 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 FAM90A8PA6NJQ4 464 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 RGS9O75916 674 aaPredicted RBP11.18□□□□□ -0.62
CD9-208ENST00000538834 MELTFP08582 738 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 CCL3L1P16619 93 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 CPEP16870 476 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 ERVFRD-1P60508 538 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 MLLT11Q13015 90 aaPredicted RBP11.18□□□□□ -0.62
CD9-208ENST00000538834 KLRD1Q13241 179 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 INSL4Q14641 139 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 TBCEQ15813 527 aaPredicted RBP11.18□□□□□ -0.62
CD9-208ENST00000538834 ACSM3Q53FZ2 586 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 DDI2Q5TDH0 399 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 NCR3LG1Q68D85 454 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 FIP1L1Q6UN15 594 aaKnown RBP11.18□□□□□ -0.62
CD9-208ENST00000538834 LRRTM1Q86UE6 522 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 ASCC1Q8N9N2 400 aaKnown RBP11.18□□□□□ -0.62
CD9-208ENST00000538834 TNFAIP8L1Q8WVP5 186 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 COQ2Q96H96 371 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 CNBD2Q96M20 576 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 EXOSC4Q9NPD3 245 aaKnown RBP11.18□□□□□ -0.62
CD9-208ENST00000538834 GSTK1Q9Y2Q3 226 aa11.18□□□□□ -0.62
CD9-208ENST00000538834 A0A0U1RQK1 487 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 PNMA8CA0A1B0GUJ8 204 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 A0A1W2PQ09 198 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 NPFFO15130 113 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 MAGEB3O15480 346 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 CDRT1O95170 752 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 UCHL1P09936 223 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 ZNF728P0DKX0 622 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 MAPK3P27361 379 aaPredicted RBP11.17□□□□□ -0.62
CD9-208ENST00000538834 IER3P46695 156 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 CAPZA1P52907 286 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 GABARAPL2P60520 117 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 PPP3R1P63098 170 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 MIDNQ504T8 468 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 GDPD3Q7L5L3 318 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 FAM185AQ8N0U4 392 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 NKX3-1Q99801 234 aaPredicted RBP11.17□□□□□ -0.62
CD9-208ENST00000538834 YTHDF1Q9BYJ9 559 aaKnown RBP11.17□□□□□ -0.62
CD9-208ENST00000538834 MEGF9Q9H1U4 602 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 LINC00574Q9H8X3 128 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 GLS2Q9UI32 602 aa11.17□□□□□ -0.62
CD9-208ENST00000538834 POMT1Q9Y6A1 747 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms