RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 GPR12P47775 334 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 PIGYQ3MUY2 71 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 C1orf100Q5SVJ3 147 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 GLRX5Q86SX6 157 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 MEGF10Q96KG7 1140 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 ANKRD36A6QL64 1941 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
RRP1B-201ENST00000340648 C2CD4DB7Z1M9 353 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 DTYMKP23919 212 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 P2RY4P51582 365 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 ZXDAP98168 799 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 PABPC1L2AQ5JQF8 200 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 RBMXL3Q8N7X1 1067 aaKnown RBP13.05□□□□□ -0.32
RRP1B-201ENST00000340648 POM121Q96HA1 1249 aa13.05□□□□□ -0.32
RRP1B-201ENST00000340648 C20orf202A1L168 122 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 PPYP01298 95 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 CCL2P13500 99 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 IL24Q13007 206 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 PRDX4Q13162 271 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 GPR87Q9BY21 358 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 SMIM10L1P0DMW3 83 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 OR2I1PQ8NGU4 316 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 LILRB1Q8NHL6 650 aaPredicted RBP13.04□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF721Q8TF20 911 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 SMIM10Q96HG1 83 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 SOX7Q9BT81 388 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 CD8AP01732 235 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 RPL29P47914 159 aaKnown RBP13.04□□□□□ -0.32
RRP1B-201ENST00000340648 CCL7P80098 99 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 TRIM61Q5EBN2 209 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 PLAC9Q5JTB6 97 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 GAPTQ8N292 157 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 APOBEC3DQ96AK3 386 aaPredicted RBP13.04□□□□□ -0.32
RRP1B-201ENST00000340648 ATP5SQ99766 215 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF576Q9H609 170 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 PARD6AQ9NPB6 346 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 SCN10AQ9Y5Y9 1956 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 A0A1W2PNV4 684 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 OPN1MWP04001 364 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 OPN1MW2P0DN77 364 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 OPN1MW3P0DN78 364 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 CTHRC1Q96CG8 243 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 SIT1Q9Y3P8 196 aa13.04□□□□□ -0.32
RRP1B-201ENST00000340648 A0A1W2PQF6 199 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 MEX3AA1L020 520 aaKnown RBP13.03□□□□□ -0.32
RRP1B-201ENST00000340648 DNASE2O00115 360 aaPredicted RBP13.03□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF17P17021 662 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 TNFSF4P23510 183 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 GREB1Q4ZG55 1949 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 A0A087WV48 116 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 DEDDO75618 318 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 HKR1P10072 659 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 FAM3AP98173 230 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 TIGITQ495A1 244 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 PLPPR2Q96GM1 343 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 C5orf66Q9H5L9 145 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 HEXA-AS1Q9H8Q6 139 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 TRBV23-1A0A0A0MS06 115 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 NAT2P11245 290 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 PNRC1Q12796 327 aaPredicted RBP13.03□□□□□ -0.32
RRP1B-201ENST00000340648 RNF151Q2KHN1 245 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 SCN2AQ99250 2005 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 PATJQ8NI35 1801 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 LSM6P62312 80 aaKnown RBP13.03□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
RRP1B-201ENST00000340648 AQP10Q96PS8 301 aa13.03□□□□□ -0.32
RRP1B-201ENST00000340648 AQP7P3A6NL99 342 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 C17orf51A8MQB3 221 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 OR7C2O60412 319 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 CD74P04233 296 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 MDKP21741 143 aaPredicted RBP13.02□□□□□ -0.32
RRP1B-201ENST00000340648 TPPP2P59282 170 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 BSXQ3C1V8 233 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.32
RRP1B-201ENST00000340648 TMPRSS7Q7RTY8 843 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 OR11L1Q8NGX0 322 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 SLC35D1Q9NTN3 355 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 CHD5Q8TDI0 1954 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 A0A1W2PR80 420 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 GAPDHP04406 335 aaKnown RBP13.02□□□□□ -0.32
RRP1B-201ENST00000340648 MMP7P09237 267 aaPredicted RBP13.02□□□□□ -0.32
RRP1B-201ENST00000340648 UBE2V2Q15819 145 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 DHRS11Q6UWP2 260 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 CHST5Q9GZS9 411 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 CCL28Q9NRJ3 127 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 ZNF391Q9UJN7 358 aa13.02□□□□□ -0.32
RRP1B-201ENST00000340648 VDAC1P21796 283 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 CEACAM6P40199 344 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 SUMO1P63165 101 aaKnown RBP13.02□□□□□ -0.33
RRP1B-201ENST00000340648 EFNB1P98172 346 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 RUNX1Q01196 453 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 SPINK9Q5DT21 86 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 CYB561D1Q8N8Q1 229 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 OR10V1Q8NGI7 309 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 GALMQ96C23 342 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 MS4A10Q96PG2 267 aa13.02□□□□□ -0.33
RRP1B-201ENST00000340648 DEFB127Q9H1M4 99 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms