RNA–Protein interactions for RNA: ENST00000315073.9

TRIM41-201, Transcript of tripartite motif containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM41, Length 3,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-201ENST00000315073 CDX2Q99626 313 aaPredicted RBP12.88□□□□□ -0.35
TRIM41-201ENST00000315073 A0A1W2PQM1 296 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 OR4A8P0C604 315 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 FUT3P21217 361 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 TMEM176BQ3YBM2 270 aaPredicted RBP12.87□□□□□ -0.35
TRIM41-201ENST00000315073 HIKESHIQ53FT3 197 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 THEM4Q5T1C6 240 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 CST9LP1Q5W188 147 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 BTNL3Q6UXE8 466 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 OR2AJ1Q8NGZ0 328 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 MRPL24Q96A35 216 aaKnown RBP12.87□□□□□ -0.35
TRIM41-201ENST00000315073 AKIRIN1Q9H9L7 192 aaPredicted RBP12.87□□□□□ -0.35
TRIM41-201ENST00000315073 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 OCIAD1Q9NX40 245 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 GDF9O60383 454 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 LMX1BO60663 402 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 FXYD4P59646 89 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 ERVFC1-1P60608 527 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 INSM1Q01101 510 aaPredicted RBP12.87□□□□□ -0.35
TRIM41-201ENST00000315073 AADACL3Q5VUY0 350 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 LRRC75AQ8NAA5 344 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 OR10A7Q8NGE5 316 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 OR52N4Q8NGI2 321 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 REEP6Q96HR9 211 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 RHBDD3Q9Y3P4 386 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 DEDDO75618 318 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 CSRP1P21291 193 aaKnown RBP12.87□□□□□ -0.35
TRIM41-201ENST00000315073 HSD11B1P28845 292 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 P2RY1P47900 373 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 NOVA1P51513 510 aaKnown RBP12.87□□□□□ -0.35
TRIM41-201ENST00000315073 HSF1Q00613 529 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 TLE4Q04727 773 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 ADIRFQ15847 76 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 SLC22A24Q8N4F4 322 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 NKAIN3Q8N8D7 197 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 OR5T1Q8NG75 326 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
TRIM41-201ENST00000315073 IFI44Q8TCB0 444 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 OR52A1Q9UKL2 312 aa12.87□□□□□ -0.35
TRIM41-201ENST00000315073 IGHV5-10-1A0A0J9YXX1 117 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 CBY3A6NI87 242 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 PATE3B3GLJ2 98 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 M0QZK8 103 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 HNF1AP20823 631 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 APOBEC1P41238 236 aaKnown RBP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 UEVLDQ8IX04 471 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 TMEM217Q8N7C4 229 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 SUMF1Q8NBK3 374 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 TP53I11O14683 189 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 ZNF43P17038 809 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 TRA2AQ13595 282 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 WDR25Q64LD2 544 aaPredicted RBP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 GLIPR1L1Q6UWM5 242 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 RTN4RL2Q86UN3 420 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 EMG1Q92979 244 aaKnown RBP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 LRP4O75096 1905 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 FAM221AA4D161 298 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 MMP16P51512 607 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 LIPHQ8WWY8 451 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 ST8SIA1Q92185 356 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 FAAP24Q9BTP7 215 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 TMEM59Q9BXS4 323 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 FKBP11Q9NYL4 201 aa12.86□□□□□ -0.35
TRIM41-201ENST00000315073 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
TRIM41-201ENST00000315073 VSIG8P0DPA2 414 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 PNLIPP16233 465 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 TRIM61Q5EBN2 209 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 RAET1LQ5VY80 246 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 OR14L1PQ8NHC6 308 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 OIT3Q8WWZ8 545 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
TRIM41-201ENST00000315073 URM1Q9BTM9 101 aaKnown RBP12.85□□□□□ -0.35
TRIM41-201ENST00000315073 ABHD14AQ9BUJ0 271 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 LRP12Q9Y561 859 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 PHF3Q92576 2039 aaKnown RBP12.85□□□□□ -0.35
TRIM41-201ENST00000315073 A0A1W2PPQ1 181 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 K7ESF4 209 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 SOCS1O15524 211 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 PDGFBP01127 241 aaPredicted RBP12.85□□□□□ -0.35
TRIM41-201ENST00000315073 ERVS71-1P61550 626 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 MEX3BQ6ZN04 569 aaKnown RBP12.85□□□□□ -0.35
TRIM41-201ENST00000315073 SLC26A10Q8NG04 563 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 OR51T1Q8NGJ9 327 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 OR5D18Q8NGL1 313 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 EXTL1Q92935 676 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 WNT5BQ9H1J7 359 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 CHST11Q9NPF2 352 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 NSG1A0A0A6YYJ2 146 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 ANKUB1A6NFN9 424 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 MASP2O00187 686 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 SUPT4H1P63272 117 aaKnown RBP12.85□□□□□ -0.35
TRIM41-201ENST00000315073 GPR157Q5UAW9 335 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 CMTM1Q8IZ96 169 aa12.85□□□□□ -0.35
TRIM41-201ENST00000315073 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms