RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 LYZL2Q7Z4W2 148 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 GATSQ8NAP1 163 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 FNDC9Q8TBE3 224 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 OR8B4Q96RC9 309 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 DKKL1Q9UK85 242 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 STRAPQ9Y3F4 350 aaKnown RBP7.66□□□□□ -1.18
VAPB-201ENST00000265619 TRBV11-1A0A0K0K1C0 115 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 FIGNL2A6NMB9 653 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 C17orf51A8MQB3 221 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 CEACAM18A8MTB9 384 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 P2RY10O00398 339 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 NKX2-1P43699 371 aaPredicted RBP7.66□□□□□ -1.18
VAPB-201ENST00000265619 DNASE1L1P49184 302 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 RAB28P51157 221 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 ZNF506Q5JVG8 444 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 C1orf100Q5SVJ3 147 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 FHL5Q5TD97 284 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 C1orf189Q5VU69 101 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 TOMM20LQ6UXN7 152 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 OTOSQ8NHW6 89 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 GPR119Q8TDV5 335 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 FGGYQ96C11 551 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 RASL10BQ96S79 203 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 GABRG3Q99928 467 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 MIEN1Q9BRT3 115 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 LIME1Q9H400 295 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 SRD5A3Q9H8P0 318 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 SSUH2Q9Y2M2 353 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 DOCK11Q5JSL3 2073 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 LOC107986453A0A1B0GWG9 222 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 C20orf202A1L168 122 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 FAM24AA6NFZ4 105 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 A8MVM7 634 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 SCDO00767 359 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 PDGFBP01127 241 aaPredicted RBP7.66□□□□□ -1.18
VAPB-201ENST00000265619 PFN1P07737 140 aaKnown RBP7.66□□□□□ -1.18
VAPB-201ENST00000265619 MRPS21P82921 87 aaKnown RBP7.66□□□□□ -1.18
VAPB-201ENST00000265619 DEFB134Q4QY38 66 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 C16orf82Q7Z2V1 217 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 TMEM18Q96B42 140 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 KLHDC7BQ96G42 594 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 ARHGAP5-AS1Q96IT6 56 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 CCDC3Q9BQI4 270 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 ALKBH7Q9BT30 221 aaPredicted RBP7.66□□□□□ -1.18
VAPB-201ENST00000265619 HRASLS2Q9NWW9 162 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 LRP12Q9Y561 859 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 BORCS7-ASMTA0A0B4J1R7 106 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 GPR137BO60478 399 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 YPEL1O60688 119 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 LILRA1O75019 489 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 BGLAPP02818 100 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 SRFP11831 508 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 MLF1P58340 268 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 CST9LP1Q5W188 147 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 IL22RA1Q8N6P7 574 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 SLC26A10Q8NG04 563 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 ADAT3Q96EY9 351 aaPredicted RBP7.65□□□□□ -1.18
VAPB-201ENST00000265619 YPEL2Q96QA6 119 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 LPAR5Q9H1C0 372 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 MKKSQ9NPJ1 570 aaPredicted RBP7.65□□□□□ -1.18
VAPB-201ENST00000265619 EHFQ9NZC4 300 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 KIAA1456Q9P272 454 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 GNG13Q9P2W3 67 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 ONECUT2O95948 504 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 EMP2P54851 167 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 UNQ5815/PRO19632Q6UWF5 114 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 Q6ZWC4 215 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 PRSS41Q7RTY9 318 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 CATSPERDQ86XM0 798 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 LFNGQ8NES3 379 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 ZNF2Q9BSG1 426 aaPredicted RBP7.65□□□□□ -1.18
VAPB-201ENST00000265619 SOHLH2Q9NX45 425 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 LRFN1Q9P244 771 aa7.65□□□□□ -1.18
VAPB-201ENST00000265619 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.65□□□□□ -1.18
VAPB-201ENST00000265619 CUL9Q8IWT3 2517 aa7.65□□□□□ -1.19
VAPB-201ENST00000265619 ZFP92A6NM28 416 aa7.65□□□□□ -1.19
VAPB-201ENST00000265619 HRKO00198 91 aa7.65□□□□□ -1.19
VAPB-201ENST00000265619 HSPB1P04792 205 aaKnown RBP7.65□□□□□ -1.19
VAPB-201ENST00000265619 FGF8P55075 233 aaPredicted RBP7.65□□□□□ -1.19
VAPB-201ENST00000265619 RAB38P57729 211 aa7.65□□□□□ -1.19
VAPB-201ENST00000265619 PRDX1Q06830 199 aaKnown RBP7.65□□□□□ -1.19
VAPB-201ENST00000265619 ALG10Q5BKT4 473 aa7.65□□□□□ -1.19
VAPB-201ENST00000265619 TCFL5Q9UL49 500 aa7.65□□□□□ -1.19
VAPB-201ENST00000265619 MEMO1Q9Y316 297 aa7.65□□□□□ -1.19
VAPB-201ENST00000265619 NSG1A0A0A6YYJ2 146 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 IGSF23A1L1A6 192 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 TNFP01375 233 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 FOLR1P15328 257 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 PEBP1P30086 187 aaKnown RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 RBMXP38159 391 aaKnown RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 RPL18Q07020 188 aaKnown RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 RUNX2Q13950 521 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 ENDOGQ14249 297 aaKnown RBP7.64□□□□□ -1.19
VAPB-201ENST00000265619 Q5PR19 223 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 VAX1Q5SQQ9 334 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 ODF3L1Q8IXM7 274 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SAXO1Q8IYX7 474 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SLC22A18ASQ8N1D0 253 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 OR5H2Q8NGV7 314 aa7.64□□□□□ -1.19
VAPB-201ENST00000265619 SLC37A2Q8TED4 501 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms