RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 OR6C3Q9NZP0 311 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 EXOGQ9Y2C4 368 aaKnown RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 RPS10-NUDT3A0A1W2PQS6 291 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 AHRRA9YTQ3 701 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 XRCC3O43542 346 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 APELAP0DMC3 54 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 BRS3P32247 399 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 LPAR6P43657 344 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 NAAAQ02083 359 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TSPO2Q5TGU0 170 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR8D4Q8NGM9 314 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR13D1Q8NGV5 346 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CISD1Q9NZ45 108 aaKnown RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 TMEFF2Q9UIK5 374 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 CES1P1Q9UKY3 287 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 LAMP3Q9UQV4 416 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TRBV23-1A0A0A0MS06 115 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 C1orf196B1AJZ1 125 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR4E1P0C645 316 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR5I1Q13606 314 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 EXOSC2Q13868 293 aaKnown RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 ACOT6Q3I5F7 207 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 LCN15Q6UWW0 184 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 NCCRP1Q6ZVX7 275 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR4C16Q8NGL9 310 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR5H6Q8NGV6 325 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ST8SIA2Q92186 375 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 PFDN5Q99471 154 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 MED9Q9NWA0 146 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CYTIPO60759 359 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ZNF354AO60765 605 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 ONECUT2O95948 504 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 HRASP01112 189 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 FAM214BQ7L5A3 538 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OR2W3Q7Z3T1 314 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ZNF75AQ96N20 296 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CIB3Q96Q77 187 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 ZNF320A2RRD8 509 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ZFPL1O95159 310 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 HOXD4P09016 255 aaPredicted RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 ACAA2P42765 397 aaKnown RBP4.72□□□□□ -1.65
LRP6-203ENST00000538239 ZNF788Q6ZQV5 615 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CDH26Q8IXH8 852 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 LINC01560Q8TB33 94 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 YIPF6Q96EC8 236 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ADGRG7Q96K78 797 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 TXN2Q99757 166 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 PIMREGQ9BSJ6 248 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 ANGPTL4Q9BY76 406 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 IL36GQ9NZH8 169 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 CLN8Q9UBY8 286 aa4.72□□□□□ -1.65
LRP6-203ENST00000538239 A0A0A6YYJ9 748 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 SSX4O60224 188 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 NAT2P11245 290 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 HIST1H1DP16402 221 aaKnown RBP4.71□□□□□ -1.65
LRP6-203ENST00000538239 PTBP1P26599 531 aaKnown RBP eCLIP4.71□□□□□ -1.655e-7■■■■□ 19.9
LRP6-203ENST00000538239 C21orf58P58505 322 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 LSM6P62312 80 aaKnown RBP4.71□□□□□ -1.65
LRP6-203ENST00000538239 KDF1Q8NAX2 398 aaPredicted RBP4.71□□□□□ -1.65
LRP6-203ENST00000538239 C17orf47Q8NEP4 570 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 OR10AC1Q8NH08 325 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 RNF141Q8WVD5 230 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 UQCC2Q9BRT2 126 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 SAV1Q9H4B6 383 aaPredicted RBP4.71□□□□□ -1.65
LRP6-203ENST00000538239 GNG13Q9P2W3 67 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 A0A0G2JMZ2 1700 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 LRRC37A2A6NM11 1700 aa4.71□□□□□ -1.65
LRP6-203ENST00000538239 DICER1Q9UPY3 1922 aaKnown RBP4.71□□□□□ -1.65
LRP6-203ENST00000538239 A0A1B0GUH1 482 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 A0A1B0GVG6 124 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 C9orf172C9J069 976 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 SULT1A3P0DMM9 295 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 SULT1A4P0DMN0 295 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 LGALS7P47929 136 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 ZNF239Q16600 458 aaKnown RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 MOB1BQ7L9L4 216 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 TMEM229BQ8NBD8 167 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 MAP6Q96JE9 813 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 TGIF2Q9GZN2 237 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 SLC25A10Q9UBX3 287 aaPredicted RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 MRM2Q9UI43 246 aaKnown RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 GREB1LQ9C091 1923 aaPredicted RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 C1QAP02745 245 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 ACSM4P0C7M7 580 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 CTRB1P17538 263 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 CTRB2Q6GPI1 263 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 OR4F5Q8NH21 305 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 OR4F4Q96R69 305 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 ACTR3CQ9C0K3 210 aaPredicted RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 PATJQ8NI35 1801 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 KIR2DS2P43631 304 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 KCNJ3P48549 501 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PCOLCEQ15113 449 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 HAGHQ16775 308 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 ZNF574Q6ZN55 896 aaPredicted RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 LYG2Q86SG7 212 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 MRGPRGQ86SM5 289 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 KCNRGQ8N5I3 272 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 SPICQ8N5J4 248 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms