RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ZNF573Q86YE8 665 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 ZNF679Q8IYX0 411 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 ADGRG5Q8IZF4 528 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 OR14K1Q8NGZ2 314 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 NDNFQ8TB73 568 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 MYDGFQ969H8 173 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 SLAMF9Q96A28 289 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 CADM1Q9BY67 442 aaKnown RBP6.48□□□□□ -1.37
VIM-202ENST00000421459 MROQ9BYG7 248 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 YIPF3Q9GZM5 350 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 CHST6Q9GZX3 395 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 INPP5EQ9NRR6 644 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 TVP23BQ9NYZ1 205 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 NUFIP1Q9UHK0 495 aaKnown RBP6.48□□□□□ -1.37
VIM-202ENST00000421459 IKZF2Q9UKS7 526 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 TBL2Q9Y4P3 447 aaKnown RBP6.48□□□□□ -1.37
VIM-202ENST00000421459 V9GYS6 101 aa6.48□□□□□ -1.37
VIM-202ENST00000421459 IGHV2-26A0A0B4J1V2 119 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 ERICH4A6NGS2 130 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 ACOD1A6NK06 481 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 FAM90A22PA8MWA6 464 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 DHRS3O75911 302 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 RPP14O95059 124 aaKnown RBP6.47□□□□□ -1.37
VIM-202ENST00000421459 PF4P02776 101 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 HMGN1P05114 100 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 CCDC159P0C7I6 412 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 T-ENOLP0DO92 83 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 RAP2AP10114 183 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 OSMP13725 252 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 ATP6V1B1P15313 513 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 GDNFP39905 211 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 RIDAP52758 137 aaKnown RBP6.47□□□□□ -1.37
VIM-202ENST00000421459 SNU13P55769 128 aaKnown RBP6.47□□□□□ -1.37
VIM-202ENST00000421459 OR12D2P58182 307 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 ROM1Q03395 351 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 TRIM25Q14258 630 aaKnown RBP6.47□□□□□ -1.37
VIM-202ENST00000421459 UBE2V2Q15819 145 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 ABCA11PQ4W5N1 156 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 KCTD18Q6PI47 426 aaPredicted RBP6.47□□□□□ -1.37
VIM-202ENST00000421459 C18orf65Q6ZTR6 163 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 GDPD3Q7L5L3 318 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 SSX6Q7RTT6 188 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 ZNF676Q8N7Q3 588 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 CANT1Q8WVQ1 401 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 CCDC124Q96CT7 223 aaKnown RBP6.47□□□□□ -1.37
VIM-202ENST00000421459 FOXRED1Q96CU9 486 aaPredicted RBP6.47□□□□□ -1.37
VIM-202ENST00000421459 ZNF714Q96N38 554 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.47□□□□□ -1.37
VIM-202ENST00000421459 PITPNC1Q9UKF7 332 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 OR52A1Q9UKL2 312 aa6.47□□□□□ -1.37
VIM-202ENST00000421459 LOC110117498-PIK3R3F6TDL0 507 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 DLGAP1O14490 977 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 GNGT2O14610 69 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 PRKYO43930 277 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 PSPNO60542 156 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 ATP5HO75947 161 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 AMY1AP04745 511 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 AMY2AP04746 511 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 CHRM2P08172 466 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 GABRR1P24046 479 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 MPZP25189 248 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 NPBWR2P48146 333 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 DYNLT3P51808 116 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 CXCR4P61073 352 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 ZNF829Q3KNS6 432 aaPredicted RBP6.46□□□□□ -1.38
VIM-202ENST00000421459 SPATS1Q496A3 300 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 KHDC1LQ5JSQ8 128 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 C9orf152Q5JTZ5 239 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 BCL2L15Q5TBC7 163 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 PRAMEF5Q5TYX0 476 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 DEGS2Q6QHC5 323 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 ZNF322Q6U7Q0 402 aaPredicted RBP6.46□□□□□ -1.38
VIM-202ENST00000421459 RNF144BQ7Z419 303 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 EGFL6Q8IUX8 553 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 ELMOD2Q8IZ81 293 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 OR4P4Q8NGL7 312 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 CEP19Q96LK0 163 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 TBX5Q99593 518 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 TMEM133Q9H2Q1 129 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 MRM2Q9UI43 246 aaKnown RBP6.46□□□□□ -1.38
VIM-202ENST00000421459 POLDIP2Q9Y2S7 368 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 TSSC4Q9Y5U2 329 aaPredicted RBP6.46□□□□□ -1.38
VIM-202ENST00000421459 SESN1Q9Y6P5 492 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 R4GMQ9 66 aa6.46□□□□□ -1.38
VIM-202ENST00000421459 ARRDC5A6NEK1 342 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 MITFO75030 526 aaPredicted RBP6.45□□□□□ -1.38
VIM-202ENST00000421459 ZNF254O75437 659 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 E2F6O75461 281 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 APOL3O95236 402 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 HAND1O96004 215 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 CALB2P22676 271 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 EPHA2P29317 976 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 DAPP51397 102 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 CRISP1P54107 249 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 SLC35A2P78381 396 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 IL24Q13007 206 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 GRK1Q15835 563 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 ETV3LQ6ZN32 361 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 SLC25A26Q70HW3 274 aa6.45□□□□□ -1.38
VIM-202ENST00000421459 MEPCEQ7L2J0 689 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms