RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 OR2M7Q8NG81 312 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 SCARF2Q96GP6 870 aaPredicted RBP12.35□□□□□ -0.43
CDH3-201ENST00000264012 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 BRCA1P38398 1863 aaKnown RBP12.35□□□□□ -0.43
CDH3-201ENST00000264012 S100A8P05109 93 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 ASAH2BP0C7U1 165 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 CALCRP30988 508 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 OR6S1Q8NH40 331 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 GPR35Q9HC97 309 aa12.35□□□□□ -0.43
CDH3-201ENST00000264012 MBP02144 154 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 ZNF787Q6DD87 383 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 CLRN3Q8NCR9 226 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 LRRC29Q8WV35 223 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 ADGRG7Q96K78 797 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 PECRQ9BY49 303 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 TSPAN2O60636 221 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 RAB4AP20338 218 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 KLF3P57682 345 aaPredicted RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 PATZ1Q9HBE1 687 aaKnown RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 CACNA1EQ15878 2313 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 SOCS1O15524 211 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 DUS4LO95620 317 aaKnown RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 OR5G3P0C626 314 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 OR10J4P0C629 311 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 SMIM10L1P0DMW3 83 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 GABRA1P14867 456 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 APOBEC4Q8WW27 367 aaKnown RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 SMIM10Q96HG1 83 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 ZNF385AQ96PM9 386 aaKnown RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 OR2H1Q9GZK4 316 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 ST6GALNAC2Q9UJ37 374 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 GAB2Q9UQC2 676 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 H7BYZ3 331 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 DXOO77932 396 aaKnown RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 TAS2R45P59539 299 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 OR4F5Q8NH21 305 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 C10orf35Q96D05 121 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 OR4F4Q96R69 305 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 WDR13Q9H1Z4 485 aa12.34□□□□□ -0.43
CDH3-201ENST00000264012 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 SIRT4Q9Y6E7 314 aaPredicted RBP12.34□□□□□ -0.43
CDH3-201ENST00000264012 ZNF727A8MUV8 499 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 K7EQM0 130 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 CTSBP07858 339 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 ZNF17P17021 662 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 MDH2P40926 338 aaKnown RBP12.33□□□□□ -0.44
CDH3-201ENST00000264012 TMEM38BQ9NVV0 291 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 MTCH1Q9NZJ7 389 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 DEFB108AA8MXU0 73 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 CELA2AP08217 269 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 CSF2RBP32927 897 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
CDH3-201ENST00000264012 NHLRC1Q6VVB1 395 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 DNASE2BQ8WZ79 361 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 PGA3P0DJD8 388 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 PMP22Q01453 160 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 GGTLC2Q14390 218 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 MPPED2Q15777 294 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 NAA60Q9H7X0 242 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 GNB4Q9HAV0 340 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 OSGIN2Q9Y236 505 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 KLHDC2Q9Y2U9 406 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 SPINK2P20155 84 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 DTYMKP23919 212 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
CDH3-201ENST00000264012 KCNJ3P48549 501 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 NANOS3P60323 173 aaKnown RBP12.33□□□□□ -0.44
CDH3-201ENST00000264012 RAB32Q13637 225 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 C17orf78Q8N4C9 275 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 RXFP4Q8TDU9 374 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 TPPP3Q9BW30 176 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 PSG11Q9UQ72 335 aa12.33□□□□□ -0.44
CDH3-201ENST00000264012 A0A0J9YW62 118 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 OR7C2O60412 319 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 ONECUT2O95948 504 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 CD82P27701 267 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 MPGP29372 298 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 GNB2P62879 340 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 SAP25Q8TEE9 199 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 RPUSD4Q96CM3 377 aaKnown RBP12.32□□□□□ -0.44
CDH3-201ENST00000264012 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 FAM90A27PA6NNH2 459 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 TO15178 435 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 ADAM20O43506 726 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 UBE2G1P62253 170 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 TNFAIP6P98066 277 aaPredicted RBP12.32□□□□□ -0.44
CDH3-201ENST00000264012 UQCC3Q6UW78 93 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 SLC26A1Q9H2B4 701 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 RASL12Q9NYN1 266 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 KCNE5Q9UJ90 142 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 PIKFYVEQ9Y2I7 2098 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 CEP250Q9BV73 2442 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 MASP2O00187 686 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 ZP4Q12836 540 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 ZNF239Q16600 458 aaKnown RBP12.32□□□□□ -0.44
CDH3-201ENST00000264012 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
CDH3-201ENST00000264012 ANXA10Q9UJ72 324 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms