RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CD83Q01151 205 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 SSX2Q16385 188 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 ZNF684Q5T5D7 378 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 ZNF626Q68DY1 528 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 ZNF782Q6ZMW2 699 aaPredicted RBP11.64□□□□□ -0.55
SDF2-202ENST00000585428 Q6ZSR3 168 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 TMEM219Q86XT9 240 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 ZNF679Q8IYX0 411 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 OR13D1Q8NGV5 346 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 OCSTAMPQ9BR26 566 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 NUFIP1Q9UHK0 495 aaKnown RBP11.64□□□□□ -0.55
SDF2-202ENST00000585428 PITPNC1Q9UKF7 332 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 ARL2BPQ9Y2Y0 163 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 DNAH3Q8TD57 4116 aa11.64□□□□□ -0.55
SDF2-202ENST00000585428 FAM90A22PA8MWA6 464 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 E2F6O75461 281 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 NXPH2O95156 264 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 TTRP02766 147 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 ZNF728P0DKX0 622 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 APOFQ13790 326 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 PLA1AQ53H76 456 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 CLVS2Q5SYC1 327 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 TMEM236Q5W0B7 351 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 ASB17Q8WXJ9 295 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 FOXRED1Q96CU9 486 aaPredicted RBP11.63□□□□□ -0.55
SDF2-202ENST00000585428 POLDIP2Q9Y2S7 368 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 V9GYS6 101 aa11.63□□□□□ -0.55
SDF2-202ENST00000585428 A0A1B0GTI1 187 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 ZNF737O75373 536 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 IGHV1-8P0DP01 117 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 IGLL1P15814 213 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 PRKACGP22612 351 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 RPS7P62081 194 aaKnown RBP11.62□□□□□ -0.55
SDF2-202ENST00000585428 MFGE8Q08431 387 aaPredicted RBP11.62□□□□□ -0.55
SDF2-202ENST00000585428 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 COMMD2Q86X83 199 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 ANGPTL5Q86XS5 388 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 OR14K1Q8NGZ2 314 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 OR5M11Q96RB7 305 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 ABCB10Q9NRK6 738 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 DNAJB9Q9UBS3 223 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 OR14J1Q9UGF5 321 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 COPS3Q9UNS2 423 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 SLC22A13Q9Y226 551 aa11.62□□□□□ -0.55
SDF2-202ENST00000585428 CCDC182A6NF36 153 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 DCTN3O75935 186 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 CHRM2P08172 466 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 PIPP12273 146 aaPredicted RBP11.61□□□□□ -0.55
SDF2-202ENST00000585428 JUNBP17275 347 aaPredicted RBP11.61□□□□□ -0.55
SDF2-202ENST00000585428 COL10A1Q03692 680 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 IL24Q13007 206 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 TCTEX1D4Q5JR98 221 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 ASRGL1Q7L266 308 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 ELMOD2Q8IZ81 293 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 ADGRG5Q8IZF4 528 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 HS3ST5Q8IZT8 346 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 OR5AU1Q8NGC0 362 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 NSL1Q96IY1 281 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 PKIBQ9C010 78 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 SEBOXQ9HB31 216 aaPredicted RBP11.61□□□□□ -0.55
SDF2-202ENST00000585428 SLC25A19Q9HC21 320 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 GPR173Q9NS66 373 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 TMEM14AQ9Y6G1 99 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 NOTCH3Q9UM47 2321 aa11.61□□□□□ -0.55
SDF2-202ENST00000585428 KMT2CQ8NEZ4 4911 aaKnown RBP11.61□□□□□ -0.55
SDF2-202ENST00000585428 NBEAL2Q6ZNJ1 2754 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 A6NIN4 97 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 DHRS7CA6NNS2 312 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 F8VVB4 439 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 F8VWA3 439 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 K7EIL1 84 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 PEX14O75381 377 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 MRPL3P09001 348 aaKnown RBP11.6□□□□□ -0.55
SDF2-202ENST00000585428 ANXA8P13928 327 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 CD33P20138 364 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 RIDAP52758 137 aaKnown RBP11.6□□□□□ -0.55
SDF2-202ENST00000585428 OR12D2P58182 307 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 MEF2CQ06413 473 aaPredicted RBP11.6□□□□□ -0.55
SDF2-202ENST00000585428 ZNF829Q3KNS6 432 aaPredicted RBP11.6□□□□□ -0.55
SDF2-202ENST00000585428 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 BATF2Q8N1L9 274 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 CANT1Q8WVQ1 401 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 ASB9Q96DX5 294 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 APOL4Q9BPW4 351 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 ZNF556Q9HAH1 456 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 TVP23BQ9NYZ1 205 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 MTCH1Q9NZJ7 389 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 HILPDAQ9Y5L2 63 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
SDF2-202ENST00000585428 MEX3AA1L020 520 aaKnown RBP11.59□□□□□ -0.55
SDF2-202ENST00000585428 GNGT2O14610 69 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 MAGEB4O15481 346 aaPredicted RBP11.59□□□□□ -0.55
SDF2-202ENST00000585428 MPIG6BO95866 241 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 T-ENOLP0DO92 83 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 VDAC2P45880 294 aaPredicted RBP11.59□□□□□ -0.55
SDF2-202ENST00000585428 ACTA2P62736 377 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 ACTG2P63267 376 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 ACTC1P68032 377 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 ACTA1P68133 377 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms