RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	PLEKHG7	Q6ZR37	379 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	CENPV	Q7Z7K6	275 aa	Predicted RBP	7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	CPO	Q8IVL8	374 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ZNF676	Q8N7Q3	588 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	TPRX1	Q8N7U7	411 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	OR5A2	Q8NGI9	324 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	OR2T29	Q8NH02	315 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	BCAS4	Q8TDM0	211 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	MYDGF	Q969H8	173 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	MALSU1	Q96EH3	234 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	TEAD3	Q99594	435 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	DGCR6L	Q9BY27	220 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	PBOV1	Q9GZY1	135 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	FAM206A	Q9NX38	181 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	RASL12	Q9NYN1	266 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	IKZF2	Q9UKS7	526 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	SLC22A13	Q9Y226	551 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	FAM172BP	A6NC97	362 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	PRR32	B1ATL7	298 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	NRAS	P01111	189 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	LPL	P06858	475 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	CCDC159	P0C7I6	412 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	ZNF728	P0DKX0	622 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	MAGEA2	P43356	314 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	APOF	Q13790	326 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	GINS1	Q14691	196 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	ABCA11P	Q4W5N1	156 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	LCN8	Q6JVE9	175 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	C16orf89	Q6UX73	402 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	GDPD3	Q7L5L3	318 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	ANGPTL5	Q86XS5	388 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	ZNF573	Q86YE8	665 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	CALHM1	Q8IU99	346 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	WFDC9	Q8NEX5	89 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	OR4X2	Q8NGF9	303 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	CAPSL	Q8WWF8	208 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	ZNF714	Q96N38	554 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	FEV	Q99581	238 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	NRIP2	Q9BQI9	281 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	OCSTAMP	Q9BR26	566 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	ZNF649	Q9BS31	505 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	ARL8B	Q9NVJ2	186 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	POLDIP2	Q9Y2S7	368 aa		7.71	□□□□□ -1.18
MSI2-208	ENST00000579466	KIAA2026	Q5HYC2	2103 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	IGHV2-26	A0A0B4J1V2	119 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466		A0A0U1RQV5	110 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	FAM230A	A0A1W2PPH8	454 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	TCRBV5S2	A0A599	114 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	MAGEB4	O15481	346 aa	Predicted RBP	7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	PRODH	O43272	600 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	DHRS3	O75911	302 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	CLIC3	O95833	236 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	ALOX5AP	P20292	161 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	SNU13	P55769	128 aa	Known RBP	7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	ODF4	Q2M2E3	257 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	ZNF829	Q3KNS6	432 aa	Predicted RBP	7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	HSP90B2P	Q58FF3	399 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	TMEM236	Q5W0B7	351 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	TCF23	Q7RTU1	214 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	TRAPPC6B	Q86SZ2	158 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	OR11H6	Q8NGC7	330 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	GIPC3	Q8TF64	312 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	DPF1	Q92782	380 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	SLAMF9	Q96A28	289 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	RCC1L	Q96I51	464 aa	Known RBP	7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	WWC2-AS2	Q96NR7	200 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	MRO	Q9BYG7	248 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	CHST6	Q9GZX3	395 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	INPP5E	Q9NRR6	644 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	ZNF446	Q9NWS9	450 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	ACTR3B	Q9P1U1	418 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	TAGLN3	Q9UI15	199 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	COPS3	Q9UNS2	423 aa		7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	TSSC4	Q9Y5U2	329 aa	Predicted RBP	7.7	□□□□□ -1.18
MSI2-208	ENST00000579466	PQLC2L	A1A4F0	135 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466		E9PQ18	207 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	LOC110117498-PIK3R3	F6TDL0	507 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466		F8VVB4	439 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466		F8VWA3	439 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466		K7N7A8	449 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	ZNF737	O75373	536 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	DNAJC8	O75937	253 aa	Predicted RBP	7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	IGHA1	P01876	353 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	TTR	P02766	147 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	CHRM2	P08172	466 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	SLC2A5	P22732	501 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	RIDA	P52758	137 aa	Known RBP	7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	FAM98B	Q52LJ0	330 aa	Known RBP	7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	CLVS2	Q5SYC1	327 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	BCL2L15	Q5TBC7	163 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	KCTD18	Q6PI47	426 aa	Predicted RBP	7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	BAIAP2L2	Q6UXY1	529 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	HS3ST5	Q8IZT8	346 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	STMN2	Q93045	179 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	SLC25A33	Q9BSK2	321 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	CHID1	Q9BWS9	393 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	CLEC7A	Q9BXN2	247 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	CADM1	Q9BY67	442 aa	Known RBP	7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	MAGIX	Q9H6Y5	334 aa		7.69	□□□□□ -1.18
MSI2-208	ENST00000579466	HES4	Q9HCC6	221 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms