RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 EWSR1Q01844 656 aaKnown RBP eCLIP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 MEF2BQ02080 365 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 FMODQ06828 376 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 RBM45Q8IUH3 476 aaKnown RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 ZCCHC14Q8WYQ9 949 aaKnown RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 MVB12AQ96EY5 273 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 FGF16O43320 207 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 SYNGR2O43760 224 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 FCMRO60667 390 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 APCSP02743 223 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 COX6CP09669 75 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 HTR1DP28221 377 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 PYCR3Q53H96 274 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 OR1L6Q8NGR2 347 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 OR6X1Q8NH79 312 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 SMOC1Q9H4F8 434 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 GABRQQ9UN88 632 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 OR2W5A6NFC9 320 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 B4E171 279 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 SH2D1BO14796 132 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 RECKO95980 971 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 ACKR1Q16570 336 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM255AQ5JRV8 349 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM211Q6ICI0 200 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 GDF6Q6KF10 455 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM91Q6ZNR0 172 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 PAQR9Q6ZVX9 377 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 HMGN2P46Q86SG4 172 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 HOGA1Q86XE5 327 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 ERGIC1Q969X5 290 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 ZMAT3Q9HA38 289 aaKnown RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TNFRSF12AQ9NP84 129 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 LTB4R2Q9NPC1 389 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 IL19Q9UHD0 177 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 DAPP1Q9UN19 280 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TOGARAM1Q9Y4F4 1720 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 KCNE1BA0A087WTH5 132 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF816-ZNF321PA0A0X1KG74 233 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 NCBP2LA6PVI3 153 aaKnown RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 HLA-DRB1P01911 266 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 TRGC1P0CF51 173 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 CD22P20273 847 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 GZMMP51124 257 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 CST6Q15828 149 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 PFN4Q8NHR9 129 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 HSPB9Q9BQS6 159 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 PDFQ9HBH1 243 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 RARRES3Q9UL19 164 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 OR51B4Q9Y5P0 310 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 NPIPB7O75200 414 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 PDCD6O75340 191 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 CA2P00918 260 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 ACER2Q5QJU3 275 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 NT5CQ8TCD5 201 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 CYB5D2Q8WUJ1 264 aa6.36□□□□□ -1.39
CNOT1-216ENST00000569240 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 COA3Q9Y2R0 106 aaPredicted RBP6.36□□□□□ -1.39
CNOT1-216ENST00000569240 B4DGG1 531 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 CFDP00746 253 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 SOD3P08294 240 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 NTSR1P30989 418 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 EFNB1P98172 346 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 RPL18Q07020 188 aaKnown RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FZD5Q13467 585 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 MESTQ5EB52 335 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 NAV1Q8NEY1 1877 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 OR2V1Q8NHB1 315 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 ORAOV1Q8WV07 137 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 NEUROG1Q92886 237 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 C19orf24Q9BVV8 132 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF430Q9H8G1 570 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM38BQ9NVV0 291 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 GDE1Q9NZC3 331 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 CICQ96RK0 1608 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 TRAV34A0A0B4J273 112 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 GALR2O43603 387 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 GYPAP02724 150 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 AGAP20933 346 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 SEC11AP67812 179 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 Q1RN00 199 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 GLRX5Q86SX6 157 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 OR10S1Q8NGN2 331 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 OR51H1Q8NH63 302 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 BCL2L2Q92843 193 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 NUDT11Q96G61 164 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 ADOQ96SZ5 270 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 S1PR3Q99500 378 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 RNF122Q9H9V4 155 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 ANXA10Q9UJ72 324 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 HDGFL3Q9Y3E1 203 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 A0A1W2PQU0 124 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 LINC00869P0C866 280 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 LIMS2Q7Z4I7 341 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM173AQ9BQD7 235 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 OR2J1Q9GZK6 312 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF346Q9UL40 294 aaKnown RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 TRAPPC6AO75865 159 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 TUSC2O75896 110 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 GUSBP08236 651 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms