RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TMEM200AQ86VY9 491 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 FBXL14Q8N1E6 418 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 C17orf78Q8N4C9 275 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 ZNF431Q8TF32 576 aaPredicted RBP12.83□□□□□ -0.35
VCAN-211ENST00000513984 OR5P3Q8WZ94 311 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 OR51B6Q9H340 312 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 PLSCR3Q9NRY6 295 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 MSRB2Q9Y3D2 182 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 FAM215AQ9Y5M1 114 aa12.83□□□□□ -0.35
VCAN-211ENST00000513984 ANKRD11Q6UB99 2663 aaPredicted RBP12.83□□□□□ -0.36
VCAN-211ENST00000513984 ZNF732B4DXR9 585 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 GEMIN2O14893 280 aaKnown RBP12.83□□□□□ -0.36
VCAN-211ENST00000513984 SNU13P55769 128 aaKnown RBP12.83□□□□□ -0.36
VCAN-211ENST00000513984 C4orf46Q504U0 113 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 C1orf185Q5T7R7 199 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 ELP2Q6IA86 826 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 NLRC3Q7RTR2 1065 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 NAXEQ8NCW5 288 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 BHLHE23Q8NDY6 225 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 OR10AD1Q8NGE0 317 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 OR5H2Q8NGV7 314 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 ABHD17AQ96GS6 310 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 ZNF71Q9NQZ8 489 aaPredicted RBP12.83□□□□□ -0.36
VCAN-211ENST00000513984 CA10Q9NS85 328 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 LUZP4Q9P127 313 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 ST3GAL6Q9Y274 331 aa12.83□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A8PA6NJQ4 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 OR5B21A6NL26 309 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 CEACAM18A8MTB9 384 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A23PA8MXZ1 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 H3BUI4 141 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 K7ENP7 123 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 LILRA1O75019 489 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 OR2A4O95047 310 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 GIPP09681 153 aaPredicted RBP12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A15PP0C7V4 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A13PP0C7W8 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A14PP0C7W9 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM90A24PP0C7X0 464 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 HAAOP46952 286 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 PPP1CBP62140 327 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 P2RY6Q15077 328 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 ZNF324BQ6AW86 544 aaPredicted RBP12.82□□□□□ -0.36
VCAN-211ENST00000513984 LAMTOR1Q6IAA8 161 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 FAM180AQ6UWF9 173 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 SLC25A42Q86VD7 318 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 CXorf67Q86X51 503 aaPredicted RBP12.82□□□□□ -0.36
VCAN-211ENST00000513984 ZNF610Q8N9Z0 462 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 OR2AK2Q8NG84 335 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 TERB2Q8NHR7 220 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 HIST1H2AAQ96QV6 131 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 OR2A7Q96R45 310 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 ST6GALNAC5Q9BVH7 336 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 OPN3Q9H1Y3 402 aaPredicted RBP12.82□□□□□ -0.36
VCAN-211ENST00000513984 OBP2BQ9NPH6 170 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 ZNF581Q9P0T4 197 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 PIPOXQ9P0Z9 390 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 ZNF230Q9UIE0 474 aaPredicted RBP12.82□□□□□ -0.36
VCAN-211ENST00000513984 TP53TG5Q9Y2B4 290 aa12.82□□□□□ -0.36
VCAN-211ENST00000513984 HEATR1Q9H583 2144 aaKnown RBP12.82□□□□□ -0.36
VCAN-211ENST00000513984 G3V3Q6 166 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 TIMP3P35625 211 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 PMELP40967 661 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 NPBWR2P48146 333 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 DAZAP2Q15038 168 aaPredicted RBP12.81□□□□□ -0.36
VCAN-211ENST00000513984 NHLRC3Q5JS37 347 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 SPATA46Q5T0L3 261 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 OR2T2Q6IF00 324 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 FAHD2BQ6P2I3 314 aaPredicted RBP12.81□□□□□ -0.36
VCAN-211ENST00000513984 BEND4Q6ZU67 534 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 OR5AP2Q8NGF4 316 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 FAHD2AQ96GK7 314 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 RADILQ96JH8 1075 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 SULT4A1Q9BR01 284 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 TMEM246Q9BRR3 403 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 FAAP24Q9BTP7 215 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 AK3Q9UIJ7 227 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 MSTNO14793 375 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 PDCD6O75340 191 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 BCL3P20749 454 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 DTYMKP23919 212 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 FGF12P61328 243 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 GNG3P63215 75 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 DHRS2Q13268 280 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 Q5BKY6 102 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 C17orf107Q6ZR85 190 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 LHFPL1Q86WI0 220 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 ZGRF1Q86YA3 2104 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 MKXQ8IYA7 352 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms