RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SLC16A11Q8NCK7 471 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 LGALS14Q8TCE9 139 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 GPR119Q8TDV5 335 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 NUDCD2Q8WVJ2 157 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 NEU4Q8WWR8 484 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 STMN2Q93045 179 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 PTH2Q96A98 100 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 C12orf43Q96C57 262 aaKnown RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 ZG16BQ96DA0 208 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 CCDC126Q96EE4 140 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 RNF170Q96K19 258 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 MS4A4EQ96PG1 132 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF382Q96SR6 550 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 RNF2Q99496 336 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 C11orf54Q9H0W9 315 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 GPR35Q9HC97 309 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM138Q9NPI0 162 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 IFT46Q9NQC8 304 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 NKX1-2Q9UD57 310 aaPredicted RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 KIF25Q9UIL4 384 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 KLHL21Q9UJP4 597 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 ICAM5Q9UMF0 924 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 PRPF19Q9UMS4 504 aaKnown RBP5.79□□□□□ -1.48
HDAC3-209ENST00000486618 MOKQ9UQ07 419 aa5.79□□□□□ -1.48
HDAC3-209ENST00000486618 A0A0G2JK05 382 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 KBTBD11-OT1A0A1B0GTJ5 212 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SH3PXD2BA1X283 911 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 EVPLLA8MZ36 301 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 B4DSR2 109 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 TRIM49D1C9J1S8 452 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 E9PQ18 207 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 H3BQF6 201 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 IFNL4K9M1U5 179 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 CDIPTO14735 213 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SIVA1O15304 175 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SGCEO43556 437 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 EIF4E2O60573 245 aaKnown RBP5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SULT1C4O75897 302 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 OR2J3O76001 311 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 TNFAIP8O95379 198 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 CRYAAP02489 173 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SBK3P0C264 359 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 ACP2P11117 423 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 FAHP16930 419 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 PMCHP20382 165 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 GABRR1P24046 479 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 HTR2CP28335 458 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 CRYBB2P43320 205 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 PPOXP50336 477 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 FAM3AP98173 230 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 ASAH1Q13510 395 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 IL13RA2Q14627 380 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SYPL1Q16563 259 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 DUSP5Q16690 384 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 DUSP7Q16829 419 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 ODF4Q2M2E3 257 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 RFX4Q33E94 735 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SPDYE7PQ495Y7 208 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 OR4F3Q6IEY1 312 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 CCDC144NLQ6NUI1 221 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 FAM71F2Q6NXP2 309 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 RANBP3LQ86VV4 465 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-209ENST00000486618 C8orf31Q8N9H6 132 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 WDR31Q8NA23 367 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF738Q8NE65 137 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 OR10W1Q8NGF6 305 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 OR51G2Q8NGK0 314 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 OR5W2Q8NH69 310 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 COQ8AQ8NI60 647 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM163Q8TC26 289 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 MAGEE2Q8TD90 523 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SLC25A43Q8WUT9 341 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-209ENST00000486618 FCAMRQ8WWV6 532 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM234Q8WY98 164 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 GGHQ92820 318 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 CREB3L1Q96BA8 519 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 MRI1Q9BV20 369 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF696Q9H7X3 374 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 KAT8Q9H7Z6 458 aaKnown RBP5.78□□□□□ -1.48
HDAC3-209ENST00000486618 IL1RAPQ9NPH3 570 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 POLE4Q9NR33 117 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SLC17A5Q9NRA2 495 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 FGFR1OP2Q9NVK5 253 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 GAR1Q9NY12 217 aaKnown RBP5.78□□□□□ -1.48
HDAC3-209ENST00000486618 GSKIPQ9P0R6 139 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 CLN8Q9UBY8 286 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SLC23A1Q9UHI7 598 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 RAB26Q9ULW5 256 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 WDR45Q9Y484 360 aa5.78□□□□□ -1.48
HDAC3-209ENST00000486618 SPIN1Q9Y657 262 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-209ENST00000486618 PSMB11A5LHX3 300 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 FAM90A10PA6NDY2 464 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 SERINC4A6NH21 518 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 C9orf118A6NHY6 69 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 NPIPB5A8MRT5 1133 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 DISC1C4P0D8 188 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 H0Y980 276 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 CCDC22O60826 627 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 TFPIP10646 304 aa5.77□□□□□ -1.49
HDAC3-209ENST00000486618 MYL2P10916 166 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms