RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SYNGR1O43759 233 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 NOS1APO75052 506 aaPredicted RBP8.01□□□□□ -1.13
LIG1-209ENST00000596104 IGLV3-1P01715 115 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 PGA5P0DJD9 388 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 VSIG8P0DPA2 414 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 ATP6V1B1P15313 513 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 JUNBP17275 347 aaPredicted RBP8.01□□□□□ -1.13
LIG1-209ENST00000596104 ALOX5APP20292 161 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 ATP6V1B2P21281 511 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 SSX2Q16385 188 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 MICAQ29983 383 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 TCTEX1D4Q5JR98 221 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 CD300LDQ6UXZ3 194 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 FAM81AQ8TBF8 368 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 ITFG2Q969R8 447 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 OTULINQ96BN8 352 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 MALSU1Q96EH3 234 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 OR8B4Q96RC9 309 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 CDRT15Q96T59 188 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 NIPSNAP1Q9BPW8 284 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 NRIP2Q9BQI9 281 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 ABCB10Q9NRK6 738 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 FAM206AQ9NX38 181 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 TAS2R1Q9NYW7 299 aa8.01□□□□□ -1.13
LIG1-209ENST00000596104 WI2-2373I1.2A0A1W2PRP0 233 aa8□□□□□ -1.13
LIG1-209ENST00000596104 A0A1W2PRX2 142 aa8□□□□□ -1.13
LIG1-209ENST00000596104 TCRBV5S2A0A599 114 aa8□□□□□ -1.13
LIG1-209ENST00000596104 ACOD1A6NK06 481 aa8□□□□□ -1.13
LIG1-209ENST00000596104 J3QT63 122 aa8□□□□□ -1.13
LIG1-209ENST00000596104 RBP4P02753 201 aa8□□□□□ -1.13
LIG1-209ENST00000596104 TK1P04183 234 aa8□□□□□ -1.13
LIG1-209ENST00000596104 ARG1P05089 322 aa8□□□□□ -1.13
LIG1-209ENST00000596104 PIPP12273 146 aaPredicted RBP8□□□□□ -1.13
LIG1-209ENST00000596104 VDAC2P45880 294 aaPredicted RBP8□□□□□ -1.13
LIG1-209ENST00000596104 KRTAP10-11P60412 298 aa8□□□□□ -1.13
LIG1-209ENST00000596104 PLCXD3Q63HM9 321 aa8□□□□□ -1.13
LIG1-209ENST00000596104 OR2T5Q6IEZ7 315 aa8□□□□□ -1.13
LIG1-209ENST00000596104 LCN8Q6JVE9 175 aa8□□□□□ -1.13
LIG1-209ENST00000596104 PLBD1Q6P4A8 553 aa8□□□□□ -1.13
LIG1-209ENST00000596104 CYP2R1Q6VVX0 501 aa8□□□□□ -1.13
LIG1-209ENST00000596104 MOB3CQ70IA8 216 aa8□□□□□ -1.13
LIG1-209ENST00000596104 OR5AU1Q8NGC0 362 aa8□□□□□ -1.13
LIG1-209ENST00000596104 OR13D1Q8NGV5 346 aa8□□□□□ -1.13
LIG1-209ENST00000596104 OR2T29Q8NH02 315 aa8□□□□□ -1.13
LIG1-209ENST00000596104 TEX47Q8TBZ9 253 aa8□□□□□ -1.13
LIG1-209ENST00000596104 ELAC2Q9BQ52 826 aaKnown RBP8□□□□□ -1.13
LIG1-209ENST00000596104 C1orf21Q9H246 121 aa8□□□□□ -1.13
LIG1-209ENST00000596104 MUC13Q9H3R2 512 aa8□□□□□ -1.13
LIG1-209ENST00000596104 HES4Q9HCC6 221 aa8□□□□□ -1.13
LIG1-209ENST00000596104 SAMHD1Q9Y3Z3 626 aaKnown RBP8□□□□□ -1.13
LIG1-209ENST00000596104 U3KQV3 271 aa8□□□□□ -1.13
LIG1-209ENST00000596104 RYR3Q15413 4870 aa8□□□□□ -1.13
LIG1-209ENST00000596104 FAM90A22PA8MWA6 464 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 PRR32B1ATL7 298 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 PRR23D1E9PI22 279 aaPredicted RBP7.99□□□□□ -1.13
LIG1-209ENST00000596104 K7N7A8 449 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 PRODHO43272 600 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 ZNF737O75373 536 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 PEX14O75381 377 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 ALDOBP05062 364 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 ZNF728P0DKX0 622 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 PRR23D2P0DMB1 279 aaPredicted RBP7.99□□□□□ -1.13
LIG1-209ENST00000596104 IGHV1-8P0DP01 117 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 PF4V1P10720 104 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 HAAOP46952 286 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 ERVK11-1P61568 191 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 RIPPLY1Q0D2K3 151 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 SPATS1Q496A3 300 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 TMEM42Q69YG0 159 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 DEGS2Q6QHC5 323 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 TCF23Q7RTU1 214 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 KRT77Q7Z794 578 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 ZNF573Q86YE8 665 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 OR10G2Q8NGC3 310 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 OR51E1Q8TCB6 317 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 TEAD3Q99594 435 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 MAGIXQ9H6Y5 334 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 REEP1Q9H902 201 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 GPR84Q9NQS5 396 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 ZNF446Q9NWS9 450 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 ACTR3BQ9P1U1 418 aa7.99□□□□□ -1.13
LIG1-209ENST00000596104 TMEM269A0A1B0GVZ9 245 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 PQLC2LA1A4F0 135 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 MEX3AA1L020 520 aaKnown RBP7.98□□□□□ -1.13
LIG1-209ENST00000596104 H3BN98 237 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 PSMD9O00233 223 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 F2RL2O00254 374 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 NXPH2O95156 264 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 NRASP01111 189 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 SLC2A5P22732 501 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 MPZP25189 248 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 AZGP1P25311 298 aaKnown RBP7.98□□□□□ -1.13
LIG1-209ENST00000596104 HCCSP53701 268 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 SLC35A2P78381 396 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 ROM1Q03395 351 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 EGFEM1PQ0D2K5 195 aa7.98□□□□□ -1.13
LIG1-209ENST00000596104 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
LIG1-209ENST00000596104 ZNF684Q5T5D7 378 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms