RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MRPL21Q7Z2W9 205 aaKnown RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ADGRE4PQ86SQ3 457 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SLC35F2Q8IXU6 374 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF679Q8IYX0 411 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 MUC15Q8N387 334 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 DEFB125Q8N687 156 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CLDN19Q8N6F1 224 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM217Q8N7C4 229 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF433Q8N7K0 673 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CYB561D1Q8N8Q1 229 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 RCBTB1Q8NDN9 531 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 OR5AU1Q8NGC0 362 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 OR4P4Q8NGL7 312 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 OR2I1PQ8NGU4 316 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CLDND2Q8NHS1 167 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CMTM2Q8TAZ6 248 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 THAP3Q8WTV1 239 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SLC25A43Q8WUT9 341 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ASB11Q8WXH4 323 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 FAM3CQ92520 227 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 PSMF1Q92530 271 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 DYRK2Q92630 601 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 UBE2E3Q969T4 207 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 FAM3DQ96BQ1 224 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SDSLQ96GA7 329 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 LOXL4Q96JB6 756 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 HHIPL1Q96JK4 782 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 FCRL2Q96LA5 508 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 PSMG3Q9BT73 122 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 ABHD14AQ9BUJ0 271 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CIPCQ9C0C6 399 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 PDFQ9HBH1 243 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CAPN10Q9HC96 672 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SRA1Q9HD15 236 aaKnown RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SIRT3Q9NTG7 399 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 C1orf123Q9NWV4 160 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 CCNL1Q9UK58 526 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SLC13A4Q9UKG4 626 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 GPR132Q9UNW8 380 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 RNF115Q9Y4L5 304 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 URGCP-MRPS24S4R325 110 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 SPACA6W5XKT8 324 aa5.42□□□□□ -1.54
SNHG1-211ENST00000539921 EVPLQ92817 2033 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 TNS1Q9HBL0 1735 aaKnown RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PPIAL4EA0A075B759 164 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM265A0A087WTH1 108 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 TRBV9A0A0B4J1U6 114 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PPIAL4CA0A0B4J2A2 164 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 GAGE12BA1L429 117 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 DDTLA6NHG4 134 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 ZNF716A6NP11 495 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 C17orf112F2Z3M2 114 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PPIAL4DF5H284 164 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 KLRC4-KLRK1H3BQV0 150 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 H7BYZ3 331 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 GPR182O15218 404 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 MPPED1O15442 326 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 LAMTOR5O43504 91 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 HLA-HP01893 362 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 LIPFP07098 398 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 STAG3L2P0CL84 134 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PPIAL4FP0DN26 164 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PPIAL4GP0DN37 164 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 GNB3P16520 340 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 TAL1P17542 331 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 UCP1P25874 307 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 TSPOP30536 169 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 SOAT1P35610 550 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PPP1CCP36873 323 aaKnown RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 ACVRL1P37023 503 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 RAB38P57729 211 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 YPEL3P61236 119 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 TRA2BP62995 288 aaKnown RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 ZFP36L1Q07352 338 aaKnown RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 Q0VG73 95 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 IHHQ14623 411 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 MMDQ15546 238 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 VAMP3Q15836 100 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 BATFQ16520 125 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 HIST3H3Q16695 136 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 C4orf17Q53FE4 359 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 CLEC12AQ5QGZ9 265 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 FBXL22Q6P050 247 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 TMEM108Q6UXF1 575 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 C12orf54Q6X4T0 127 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 LRRC69Q6ZNQ3 347 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 PAQR9Q6ZVX9 377 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 GTF2H5Q6ZYL4 71 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 NEGR1Q7Z3B1 354 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 RTN4RL1Q86UN2 441 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 FAM219AQ8IW50 185 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 SELENOHQ8IZQ5 122 aaKnown RBP5.41□□□□□ -1.54
SNHG1-211ENST00000539921 SLC39A11Q8N1S5 342 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 NPEPL1Q8NDH3 523 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 CADM4Q8NFZ8 388 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 OR5A1Q8NGJ0 315 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 ZG16BQ96DA0 208 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 ALG14Q96F25 216 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 MRAP2Q96G30 205 aa5.41□□□□□ -1.54
SNHG1-211ENST00000539921 CCDC3Q9BQI4 270 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms