RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 COL4A2P08572 1712 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 IGHV3OR16-10A0A075B7F0 116 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 A0A1B0GTI1 187 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TMEM218A2RU14 115 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 RNF222A6NCQ9 220 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 METTL21EPA6NDL7 271 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 GGT3PA6NGU5 568 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PCP4L1A6NKN8 68 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TMEM212A6NML5 194 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 A8MX80 341 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF732B4DXR9 585 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 WRBO00258 174 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SAP18O00422 153 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 GOSR2O14653 212 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ARPC3O15145 178 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MAGEB4O15481 346 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 MLNRO43193 412 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 FGF16O43320 207 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR1F1O43749 312 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 NUDT21O43809 227 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 CDC40O60508 579 aaKnown RBP eCLIP2.18□□□□□ -2.06
VPS41-206ENST00000418457 EIF4E2O60573 245 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 SRPX2O60687 465 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 B4GALT2O60909 372 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SH3BGRLO75368 114 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MTX2O75431 263 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SCGNO76038 276 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 GLSO94925 669 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 NDUFB2O95178 105 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PET100P0DJ07 73 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 C8orf89P0DMQ9 161 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF35P13682 527 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TPT1P13693 172 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 SPI1P17947 270 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TBPP20226 339 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF10P21506 573 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 TBXA2RP21731 343 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 RPS4Y1P22090 263 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 HIST1H1TP22492 207 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 EDNRAP25101 427 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 S100PP25815 95 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 DPP4P27487 766 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TEAD1P28347 426 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PBLDP30039 288 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 SRD5A2P31213 254 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 CD70P32970 193 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ACVR1BP36896 505 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PMELP40967 661 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MAP3K8P41279 467 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 GPR1P46091 355 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 GPR4P46093 362 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 RABIFP47224 123 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 AKR1D1P51857 326 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 HCCSP53701 268 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR12D2P58182 307 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TAS2R31P59538 309 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TAS2R20P59543 309 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PRPS1P60891 318 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 UBE2MP61081 183 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 SSTP61278 116 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ERVK-16P61578 105 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 STXBP1P61764 594 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF85Q03923 595 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 FUT5Q11128 374 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MADCAM1Q13477 382 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 CRMP1Q14194 572 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 INSL4Q14641 139 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MEF2DQ14814 521 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 LASP1Q14847 261 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 PON3Q15166 354 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 LTB4RQ15722 352 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZIC1Q15915 447 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 CCL14Q16627 93 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MS4A18Q3C1V0 323 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF528Q3MIS6 628 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 LINC00303Q3SY05 128 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 RNF212Q495C1 297 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 Q499Y3 187 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 CCSMST1Q4G0I0 132 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 C9orf64Q5T6V5 341 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 CST9Q5W186 159 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 EIF5AL1Q6IS14 154 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 SLC48A1Q6P1K1 146 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 DRAM2Q6UX65 266 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 B3GLCTQ6Y288 498 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 C17orf107Q6ZR85 190 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 LINC00696Q6ZRV3 163 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ACOT7LQ6ZUV0 252 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 Q6ZVQ6 151 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SLC36A1Q7Z2H8 476 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 HSD11B1LQ7Z5J1 315 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF546Q86UE3 836 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MYPOPQ86VE0 399 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 AMZ2Q86W34 360 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PAQR7Q86WK9 346 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 NKAIN4Q8IVV8 208 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SLC35F2Q8IXU6 374 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 DND1Q8IYX4 353 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 TDHQ8IZJ6 230 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF619Q8N2I2 560 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms