RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.62
SHKBP1-208ENST00000595726 KRT84Q9NSB2 600 aa11.15□□□□□ -0.62
SHKBP1-208ENST00000595726 TVP23BQ9NYZ1 205 aa11.15□□□□□ -0.62
SHKBP1-208ENST00000595726 CD300LBA8K4G0 201 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 XRCC2O43543 280 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 LYNP07948 512 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 EPHA2P29317 976 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 NAA10P41227 235 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 BMXP51813 675 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 UBE2E1P51965 193 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 RPS7P62081 194 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 APOFQ13790 326 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 CCDC121Q6ZUS5 278 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 PRSS45Q7RTY3 260 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 RNF144BQ7Z419 303 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 ZDHHC13Q8IUH4 622 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 CMTM4Q8IZR5 234 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 FAM216BQ8N7L0 139 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 PIFOQ8TCI5 191 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 SPRYD4Q8WW59 207 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 SEH1LQ96EE3 360 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 FAM234AQ9H0X4 552 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 OPA3Q9H6K4 179 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 DNAJC27Q9NZQ0 273 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 KAAG1Q9UBP8 84 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 KLHDC2Q9Y2U9 406 aa11.14□□□□□ -0.63
SHKBP1-208ENST00000595726 CCDC182A6NF36 153 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 ZAR1LA6NP61 321 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 M0R129 80 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 TBX1O43435 398 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 PRKYO43930 277 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 ANXA2P07355 339 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 ZNF121P58317 390 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 ACSM1Q08AH1 577 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 IKZF1Q13422 519 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 LRRC75BQ2VPJ9 315 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 WDR38Q5JTN6 314 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 SLX4IPQ5VYV7 408 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 Q6ZS46 218 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 OR56B2PQ8NGI1 322 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 PYDC1Q8WXC3 89 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 ADAT1Q9BUB4 502 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 PRRG3Q9BZD7 231 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 TRIM36Q9NQ86 728 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 OAZ3Q9UMX2 235 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 N6AMT1Q9Y5N5 214 aa11.13□□□□□ -0.63
SHKBP1-208ENST00000595726 CSMD3Q7Z407 3707 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 hCG_1807616A0A1W2PRN6 198 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 GGT3PA6NGU5 568 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 A6NLC8 198 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 E9PQ18 207 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 LHBP01229 141 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 APOC1P02654 83 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 H2BFMP0C1H6 154 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 SELLP14151 372 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 AMY2BP19961 511 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 ACTR3P61158 418 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 SLC35A2P78381 396 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 EGFEM1PQ0D2K5 195 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 DMRTC1Q5HYR2 192 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 CASC10Q5T4H9 136 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 C12orf73Q69YU5 71 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 HCP5Q6MZN7 132 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 FAM57BQ71RH2 274 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 SLC16A9Q7RTY1 509 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 THEM6Q8WUY1 208 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 CENPNQ96H22 339 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 TEAD3Q99594 435 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 CIB1Q99828 191 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 WNT10AQ9GZT5 417 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 SLC22A4Q9H015 551 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 RAB18Q9NP72 206 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 MRPL15Q9P015 296 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 ZNF319Q9P2F9 582 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 NOP16Q9Y3C1 178 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 HYDINQ4G0P3 5121 aa11.12□□□□□ -0.63
SHKBP1-208ENST00000595726 hCG_38984A0A1B0GV85 526 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 GMDSO60547 372 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 TFF1P04155 84 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 MRPL3P09001 348 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 PF4V1P10720 104 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 ALOX5APP20292 161 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 RAB13P51153 203 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 EFNB1P98172 346 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 FAM3AP98173 230 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 DOC2BQ14184 412 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 KPNB1Q14974 876 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 TIGD6Q17RP2 521 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 LCN1P1Q5VSP4 162 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 TEX36Q5VZQ5 186 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 BCDIN3DQ7Z5W3 292 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 TCEANCQ8N8B7 351 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 OR5T2Q8NGG2 359 aa11.11□□□□□ -0.63
SHKBP1-208ENST00000595726 OR52H1Q8NGJ2 320 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms