RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 IGKV1-27A0A075B6S5 117 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 A0A1B0GW55 424 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 PQLC2LA1A4F0 135 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 KIAA1324LA8MWY0 1029 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 PTGES3LE9PB15 166 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 SYNGR1O43759 233 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 CDK1P06493 297 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 CCDC159P0C7I6 412 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4L2P0CJ85 424 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4L3P0CJ86 424 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4L4P0CJ87 422 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4L5P0CJ88 424 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4L6P0CJ89 424 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4L7P0CJ90 424 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DVL1P1P54792 670 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 MRPL28Q13084 256 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 CDK5R1Q15078 307 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 CR1LQ2VPA4 569 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4L9Q6RFH8 374 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DCDC5Q6ZRR9 648 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 GLCCI1Q86VQ1 547 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF485Q8NCK3 441 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 CCDC54Q8NEL0 328 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 OR52N1Q8NH53 320 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 RPS4Y2Q8TD47 263 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 AQP3Q92482 292 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF488Q96MN9 340 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 SNTG1Q9NSN8 517 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 CHCHD3Q9NX63 227 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 CTSZQ9UBR2 303 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 DUX4Q9UBX2 424 aa11.51□□□□□ -0.57
SHKBP1-207ENST00000595631 IGKV1-9A0A0C4DH69 117 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 SRRM5B3KS81 715 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 FCN3O75636 299 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 FSTL3O95633 263 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 PLATP00750 562 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF12P17014 697 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 ZNF20P17024 532 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 HAAOP46952 286 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 HSPA13P48723 471 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 FAM120AOSQ5T036 256 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 TEX36Q5VZQ5 186 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 RPL22L1Q6P5R6 122 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 RNF144BQ7Z419 303 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 ANGPTL5Q86XS5 388 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 CALHM1Q8IU99 346 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 EGFL6Q8IUX8 553 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 FGFRL1Q8N441 504 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 OR5T2Q8NGG2 359 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 OR13C5Q8NGS8 318 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 OR10Z1Q8NGY1 313 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 TSEN15Q8WW01 171 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 NEIL1Q96FI4 390 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 COMMD4Q9H0A8 199 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 RASSF4Q9H2L5 321 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 MIOXQ9UGB7 285 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 RAB26Q9ULW5 256 aa11.5□□□□□ -0.57
SHKBP1-207ENST00000595631 TRAV38-1A0A0B4J264 116 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 TRAV20A0A0B4J274 112 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 PNMA8CA0A1B0GUJ8 204 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 TRAPPC2LH3BP13 241 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 TNFRSF13BO14836 293 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 MYL12BO14950 172 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 OGG1O15527 345 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 ADAM20O43506 726 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 CRLF1O75462 422 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 GATBO75879 557 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 ATF1P18846 271 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 CFHR2P36980 270 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 SOX2P48431 317 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 PITPNBP48739 271 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 SLC35A2P78381 396 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 MED21Q13503 144 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 CCDC58Q4VC31 144 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 ESCO2Q56NI9 601 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 NANOGP1Q8N7R0 232 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 OR8B3Q8NGG8 313 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 OR13C9Q8NGT0 318 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 OR8B2Q96RD0 313 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 CCL13Q99616 98 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 SMURF1Q9HCE7 757 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 TRIM36Q9NQ86 728 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 MMP26Q9NRE1 261 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 SCN3BQ9NY72 215 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 SLC7A11Q9UPY5 501 aa11.49□□□□□ -0.57
SHKBP1-207ENST00000595631 A8MXK9 166 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 J3QT63 122 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 FOXH1O75593 365 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 INMTO95050 263 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 AVPP01185 164 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 MT-ND2P03891 347 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 SELLP14151 372 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 AMY2BP19961 511 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 GLRA1P23415 457 aa11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 AZGP1P25311 298 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-207ENST00000595631 WNT4P56705 351 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms