RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 PEG3Q9GZU2 1588 aa2.05□□□□□ -2.08
GTF2H3-209ENST00000542279 NUP205Q92621 2012 aa2.05□□□□□ -2.08
GTF2H3-209ENST00000542279 CCL15-CCL14A0A0B4J2E2 113 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 IGHV1-3A0A0C4DH29 117 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 GSTTP1A0A1W2PQM5 241 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 BTNL10A8MVZ5 291 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 CENPBD1B2RD01 187 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 J3QT63 122 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 K7EN84 100 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 ENSAO43768 121 aaKnown RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 RCBTB2O95199 551 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 IGLV2-8P01709 118 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 CD28P10747 220 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 PSMB5P28074 263 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 ERFP50548 548 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 ETV1P50549 477 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 HADHBP55084 474 aaKnown RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 CMC4P56277 68 aaPredicted RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 MTPNP58546 118 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 LAMTOR4Q0VGL1 99 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 LY6EQ16553 131 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 CCL15Q16663 113 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 AADACL4Q5VUY2 407 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 KHDRBS2Q5VWX1 349 aaKnown RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 MFSD14CQ5VZR4 134 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 DEGS2Q6QHC5 323 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 BRWD3Q6RI45 1802 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 EPGNQ6UW88 154 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 COL27A1Q8IZC6 1860 aaPredicted RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 TRIML2Q8N7C3 387 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 OR10Z1Q8NGY1 313 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 SFXN5Q8TD22 340 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 RTN4IP1Q8WWV3 396 aaPredicted RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 ANKRD7Q92527 254 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 LRRC39Q96DD0 335 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 C8orf76Q96K31 380 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 GLT1D1Q96MS3 346 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 NAPGQ99747 312 aaPredicted RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 XKR8Q9H6D3 395 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 AGPAT3Q9NRZ7 376 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 YEATS2Q9ULM3 1422 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 RBMX2Q9Y388 322 aaKnown RBP2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 ORC6Q9Y5N6 252 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 ENPP4Q9Y6X5 453 aa2.04□□□□□ -2.08
GTF2H3-209ENST00000542279 AQRO60306 1485 aaKnown RBP eCLIP2.03□□□□□ -2.083e-6■■■□□ 15.2
GTF2H3-209ENST00000542279 IGLV3-12A0A075B6K2 115 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 IGHV6-1A0A0B4J1U7 121 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 IGHV2OR16-5A0A0B4J2B6 119 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 IGKV6-21A0A0C4DH24 114 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 FAM240AA0A1B0GVK7 77 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PSMD11O00231 422 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 SPOPO43791 374 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 CCDC22O60826 627 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 NPPAP01160 153 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 MMP7P09237 267 aaPredicted RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 OR5AL1P0C617 328 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 NEFHP12036 1026 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 CCNOP22674 350 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PAX6P26367 422 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PRSS3P35030 304 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PSMB2P49721 201 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PLTPP55058 493 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 TAS2R43P59537 309 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 MYL6P60660 151 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PPP1CAP62136 330 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 GRB2P62993 217 aaKnown RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 DYNC1I2Q13409 638 aaKnown RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PRSS8Q16651 343 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 KLHL12Q53G59 568 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 FAM27D1Q5T7N8 215 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 UNQ9165/PRO28630Q6UXU0 137 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 NEGR1Q7Z3B1 354 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 HMGN2P46Q86SG4 172 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 FAM9CQ8IZT9 166 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 ZCCHC24Q8N2G6 241 aaKnown RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 OSR2Q8N2R0 312 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 RNF182Q8N6D2 247 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 LRRC20Q8TCA0 184 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 GPR82Q96P67 336 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 ZNF2Q9BSG1 426 aaPredicted RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 ZNF717Q9BY31 904 aaPredicted RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 STMN4Q9H169 189 aaPredicted RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 ZSCAN16Q9H4T2 348 aaPredicted RBP2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 PLEKHF2Q9H8W4 249 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 VCX3AQ9NNX9 186 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 STMN3Q9NZ72 180 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 ZNF229Q9UJW7 825 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 CFL2Q9Y281 166 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 STK38LQ9Y2H1 464 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 S4R3C0 116 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 SHANK1Q9Y566 2161 aa2.03□□□□□ -2.08
GTF2H3-209ENST00000542279 SEC16AO15027 2179 aa2.02□□□□□ -2.09
GTF2H3-209ENST00000542279 PRR14LQ5THK1 2151 aa2.02□□□□□ -2.09
GTF2H3-209ENST00000542279 IGLV2-18A0A075B6J9 118 aa2.02□□□□□ -2.09
GTF2H3-209ENST00000542279 LOC102724200A0A096LPH7 203 aaPredicted RBP2.02□□□□□ -2.09
GTF2H3-209ENST00000542279 A0A1W2PQ67 120 aa2.02□□□□□ -2.09
GTF2H3-209ENST00000542279 ISPDA4D126 451 aa2.02□□□□□ -2.09
GTF2H3-209ENST00000542279 RPL36A-HNRNPH2H7BZ11 118 aa2.02□□□□□ -2.09
GTF2H3-209ENST00000542279 K7EM74 188 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms