RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 A0A096LPE4 126 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 A0A1W2PPZ6 126 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 RPL36A-HNRNPH2H7BZ11 118 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 HPXP02790 462 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 SERPINA5P05154 406 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 MELTFP08582 738 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 COX5BP10606 129 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 CXCL3P19876 107 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 S100A1P23297 94 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 GABRR1P24046 479 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 CD34P28906 385 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 BLVRBP30043 206 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 ALDH3B1P43353 468 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 ZNF81P51508 661 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 SOX8P57073 446 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 SNRPD2P62316 118 aaKnown RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 RTP5Q14D33 572 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 CHRFAM7AQ494W8 412 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 NLRC3Q7RTR2 1065 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 PEG10Q86TG7 708 aaKnown RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 CD163Q86VB7 1156 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 PAQR4Q8N4S7 273 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 CSNK2A3Q8NEV1 391 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 OR10K1Q8NGX5 313 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 PIGCQ92535 297 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 APOBEC3DQ96AK3 386 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 PAPOLGQ9BWT3 736 aaKnown RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 GP6Q9HCN6 339 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 NPDC1Q9NQX5 325 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 DLL4Q9NR61 685 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 GLRX2Q9NS18 164 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 ZNF701Q9NV72 531 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 NOP16Q9Y3C1 178 aaKnown RBP9.38□□□□□ -0.91
SPIDR-204ENST00000517824 RHBDD3Q9Y3P4 386 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
SPIDR-204ENST00000517824 DOCK7Q96N67 2140 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 NAV2Q8IVL1 2488 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 IGKV1-9A0A0C4DH69 117 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 hCG_38984A0A1B0GV85 526 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 C5orf49A4QMS7 147 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 M0R233 179 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-204ENST00000517824 SOCS1O15524 211 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 HLA-AP01891 365 aaKnown RBP9.37□□□□□ -0.91
SPIDR-204ENST00000517824 PMP2P02689 132 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 VSIG10L2P0DP72 767 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 ZNF35P13682 527 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-204ENST00000517824 HRH1P35367 487 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 TNFSF10P50591 281 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 FUT6P51993 359 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 ARPC4P59998 168 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 IFITM2Q01629 132 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 TGFBR3Q03167 851 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 MRPL49Q13405 166 aaKnown RBP9.37□□□□□ -0.91
SPIDR-204ENST00000517824 GK2Q14410 553 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-204ENST00000517824 UBE2V2Q15819 145 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 LPCAT3Q6P1A2 487 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 IGF2-ASQ6U949 168 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 C9orf62Q8N4C0 152 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 C12orf45Q8N5I9 185 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-204ENST00000517824 TMEM104Q8NE00 496 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 OR2AK2Q8NG84 335 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 OR4S1Q8NGB4 309 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 OR52B4Q8NGK2 314 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 OR5L1Q8NGL2 311 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
SPIDR-204ENST00000517824 ARHGAP5-AS1Q96IT6 56 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 HIST1H2AAQ96QV6 131 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 SLC6A7Q99884 636 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 PDCD10Q9BUL8 212 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 ASCL3Q9NQ33 180 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 PLEKHJ1Q9NW61 149 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 SLC2A8Q9NY64 477 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 ESPL1Q14674 2120 aa9.37□□□□□ -0.91
SPIDR-204ENST00000517824 MYO18BQ8IUG5 2567 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 C5orf63A6NC05 138 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 L7N2F9 121 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 MFNGO00587 321 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 NKX2-8O15522 239 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 SLC22A5O76082 557 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 TOXO94900 526 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 HLA-HP01893 362 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 MMP7P09237 267 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-204ENST00000517824 OR4E1P0C645 316 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 PGAM2P15259 253 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 VAMP1P23763 118 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 MPZP25189 248 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 MPGP29372 298 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 AGTR1P30556 359 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 ZP1P60852 638 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
SPIDR-204ENST00000517824 PMP22Q01453 160 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 CLN3Q13286 438 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 MPPED2Q15777 294 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 DEFB109BQ30KR1 87 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 KRTAP27-1Q3LI81 207 aa9.36□□□□□ -0.91
SPIDR-204ENST00000517824 OR52W1Q6IF63 320 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms