RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 DCAF12Q5T6F0 453 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 AADACL3Q5VUY0 350 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 PEG10Q86TG7 708 aaKnown RBP15.35■□□□□ 0.05
USH1C-205ENST00000527020 OR5H2Q8NGV7 314 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 OR2AE1Q8NHA4 323 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 CT55Q8WUE5 264 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 MAFIPQ8WZ33 124 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 ROBO4Q8WZ75 1007 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 RTBDNQ9BSG5 229 aaPredicted RBP15.35■□□□□ 0.05
USH1C-205ENST00000527020 ST6GALNAC5Q9BVH7 336 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 TMEM38BQ9NVV0 291 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 EEF1E1-BLOC1S5C9J1V9 151 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 SGCEO43556 437 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 HPP00738 406 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 TCN2P20062 427 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 DLSTP36957 453 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 SNU13P55769 128 aaKnown RBP15.35■□□□□ 0.05
USH1C-205ENST00000527020 SUPT4H1P63272 117 aaKnown RBP15.35■□□□□ 0.05
USH1C-205ENST00000527020 BEX5Q5H9J7 111 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 ZNF774Q6NX45 483 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 ACOT7LQ6ZUV0 252 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 PDZD9Q8IXQ8 264 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 OSGIN2Q9Y236 505 aa15.35■□□□□ 0.05
USH1C-205ENST00000527020 PINLYPA6NC86 204 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 SDCBPO00560 298 aaPredicted RBP15.34■□□□□ 0.05
USH1C-205ENST00000527020 CXCL13O43927 109 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 MTRF1O75570 445 aaKnown RBP15.34■□□□□ 0.05
USH1C-205ENST00000527020 FGF2P09038 288 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 CST2P09228 141 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 PI3P19957 117 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 FPR2P25090 351 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 SERPINF1P36955 418 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 ACER2Q5QJU3 275 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 ABLIM2Q6H8Q1 611 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 TCEAL6Q6IPX3 200 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 DRAM2Q6UX65 266 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 ESX1Q8N693 406 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 CCDC54Q8NEL0 328 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 OR52H1Q8NGJ2 320 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 TCEAL3Q969E4 200 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 ZNF75AQ96N20 296 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 GPR173Q9NS66 373 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 MBD2Q9UBB5 411 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 PFDN2Q9UHV9 154 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 LOXL2Q9Y4K0 774 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 KANTRA0A1W2PQU2 76 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 CRHP06850 196 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 ICAM2P13598 275 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 BAMBIQ13145 260 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 KRTAP27-1Q3LI81 207 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 WIPI1Q5MNZ9 446 aaPredicted RBP15.34■□□□□ 0.05
USH1C-205ENST00000527020 CLEC18BQ6UXF7 455 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 TMEM105Q8N8V8 129 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 ALKBH3Q96Q83 286 aaPredicted RBP15.34■□□□□ 0.05
USH1C-205ENST00000527020 RASL12Q9NYN1 266 aa15.34■□□□□ 0.05
USH1C-205ENST00000527020 IGKV1D-8A0A087WSZ0 117 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 B8ZZF3 427 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 SFT2D2O95562 160 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 PATE4P0C8F1 98 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 B4GALT1P15291 398 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 LUMP51884 338 aaPredicted RBP15.33■□□□□ 0.04
USH1C-205ENST00000527020 FAM74A1Q5RGS3 127 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 C6orf15Q6UXA7 325 aaPredicted RBP15.33■□□□□ 0.04
USH1C-205ENST00000527020 OVCH2Q7RTZ1 564 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 SULF2Q8IWU5 870 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 CSNK2A3Q8NEV1 391 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 SEMA6DQ8NFY4 1073 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 OR10D3Q8NH80 312 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 OR1F12Q8NHA8 337 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 CPT1CQ8TCG5 803 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 SLC25A32Q9H2D1 315 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 PRR13Q9NZ81 148 aa15.33■□□□□ 0.04
USH1C-205ENST00000527020 MCTS1Q9ULC4 181 aaKnown RBP15.33■□□□□ 0.04
USH1C-205ENST00000527020 OR6C6A6NF89 314 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 SERPINE3A8MV23 424 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 LGALS8O00214 317 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 MSTNO14793 375 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 KCNAB3O43448 404 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 HTR3BO95264 441 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 ZNF32P17041 273 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 CPT2P23786 658 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 PRSS12P56730 875 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 TUSC1Q2TAM9 212 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 AAED1Q7RTV5 226 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 GLRX5Q86SX6 157 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 BVESQ8NE79 360 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 AKR7LQ8NHP1 331 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 PSMF1Q92530 271 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 REEP6Q96HR9 211 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 Q96M66 194 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 ELL3Q9HB65 397 aaPredicted RBP15.32■□□□□ 0.04
USH1C-205ENST00000527020 IGKV1-27A0A075B6S5 117 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 C13orf42A0A1B0GVH6 325 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 C5orf51A6NDU8 294 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 FIGNL2A6NMB9 653 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 DHRS7CA6NNS2 312 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 RPS2P15880 293 aaKnown RBP15.32■□□□□ 0.04
USH1C-205ENST00000527020 PSMB6P28072 239 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 SSPNQ14714 243 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 SLC9A3R2Q15599 337 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms