RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 IL36GQ9NZH8 169 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF107Q9UII5 783 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-210ENST00000498259 OSGIN2Q9Y236 505 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 POLDIP2Q9Y2S7 368 aa7.29□□□□□ -1.24
SF3A1-210ENST00000498259 TRAV18A0A075B6X5 111 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 IGKV1-9A0A0C4DH69 117 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 PLSCR5A0PG75 271 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 TMEM210A6NLX4 147 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 ZNF850A8MQ14 1090 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 TMEM14DPA8MWL7 114 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 IQCF6A8MYZ5 107 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 M0R1B8 84 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 LDLRAD4O15165 306 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 AKR7A2O43488 359 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 NGFP01138 241 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 LPLP06858 475 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 GSTP1P09211 210 aaKnown RBP7.28□□□□□ -1.24
SF3A1-210ENST00000498259 CSF1P09603 554 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 CSF3P09919 207 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 FAM157BP0CG42 384 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 NAT2P11245 290 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 GLRXP35754 106 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 WNT5AP41221 380 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 CBX5P45973 191 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 TAS2R20P59543 309 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 NAAAQ02083 359 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 PDZK1IP1Q13113 114 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 SNTB2Q13425 540 aaKnown RBP7.28□□□□□ -1.24
SF3A1-210ENST00000498259 DYRK1AQ13627 763 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 FBXL19-AS1Q494R0 122 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 SLC22A6Q4U2R8 563 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 PRR30Q53SZ7 412 aaPredicted RBP7.28□□□□□ -1.24
SF3A1-210ENST00000498259 MBNL2Q5VZF2 373 aaKnown RBP7.28□□□□□ -1.24
SF3A1-210ENST00000498259 FIP1L1Q6UN15 594 aaKnown RBP7.28□□□□□ -1.24
SF3A1-210ENST00000498259 LINC00596Q86U02 117 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 TMEM200AQ86VY9 491 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 RPRMLQ8N4K4 120 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 CHST4Q8NCG5 386 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 OR51T1Q8NGJ9 327 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 OR13G1Q8NGZ3 307 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 SSC4DQ8WTU2 575 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 CA5BP1Q8WTZ4 195 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 CMBLQ96DG6 245 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 SLC25A38Q96DW6 304 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 RNF170Q96K19 258 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 ABHD1Q96SE0 405 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 OR2J1Q9GZK6 312 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 ESRP2Q9H6T0 727 aaKnown RBP7.28□□□□□ -1.24
SF3A1-210ENST00000498259 KCNJ16Q9NPI9 418 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 ERRFI1Q9UJM3 462 aaPredicted RBP7.28□□□□□ -1.24
SF3A1-210ENST00000498259 RHBDD3Q9Y3P4 386 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 DMXL2Q8TDJ6 3036 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 LOC400499M0QZD8 3231 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 MED12LQ86YW9 2145 aa7.28□□□□□ -1.24
SF3A1-210ENST00000498259 CACNA1GO43497 2377 aa7.27□□□□□ -1.24
SF3A1-210ENST00000498259 GTF3C1Q12789 2109 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 DOCK7Q96N67 2140 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 PTPRQQ9UMZ3 2332 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 A0A0B4J203 849 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 IGHV2OR16-5A0A0B4J2B6 119 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 IGHV1-18A0A0C4DH31 117 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM240BA0A1B0GVZ2 78 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 A0A1W2PQ09 198 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 A0A1W2PR80 420 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 PQLC2LA1A4F0 135 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A10PA6NDY2 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A18PA6NE21 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A16PA6NEW6 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A20PA6NIJ5 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A8PA6NJQ4 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A7PA6NKC0 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 SERPINE3A8MV23 424 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A22PA8MWA6 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A12PA8MX19 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A5PA8MXJ8 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A23PA8MXZ1 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 TRAPPC2LH3BP13 241 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 TIMM8AO60220 97 aaPredicted RBP7.27□□□□□ -1.25
SF3A1-210ENST00000498259 CDC14BO60729 498 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 AGFG2O95081 481 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 MPIG6BO95866 241 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A15PP0C7V4 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A13PP0C7W8 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A14PP0C7W9 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM90A24PP0C7X0 464 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 VSIG8P0DPA2 414 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 MGMTP16455 207 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 KITLGP21583 273 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 OR3A4PP47883 348 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF83P51522 516 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 SORDQ00796 357 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FAM27E3Q08E93 113 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 LY6DQ14210 128 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 HLXQ14774 488 aaPredicted RBP7.27□□□□□ -1.25
SF3A1-210ENST00000498259 OXA1LQ15070 435 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 OR8G1Q15617 311 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 TSC22D1Q15714 1073 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 BAK1Q16611 211 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 PNLIPRP3Q17RR3 467 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 PLET1Q6UQ28 207 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms