RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 AGBL3Q8NEM8 1001 aa20.02■□□□□ 0.8
CHMP1A-206ENST00000549139 GMLQ99445 158 aa20.02■□□□□ 0.8
CHMP1A-206ENST00000549139 ZC3H12CQ9C0D7 883 aaKnown RBP20.02■□□□□ 0.8
CHMP1A-206ENST00000549139 IRS4O14654 1257 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-206ENST00000549139 CT47B1P0C2W7 299 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-206ENST00000549139 FKBP5Q13451 457 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-206ENST00000549139 PKN2Q16513 984 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-206ENST00000549139 RSBN1LQ6PCB5 846 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-206ENST00000549139 CCDC191Q8NCU4 936 aa20.01■□□□□ 0.79
CHMP1A-206ENST00000549139 RTL5Q5HYW3 569 aaPredicted RBP20■□□□□ 0.79
CHMP1A-206ENST00000549139 PITPNM2Q9BZ72 1349 aa20■□□□□ 0.79
CHMP1A-206ENST00000549139 NEXNQ0ZGT2 675 aa19.99■□□□□ 0.79
CHMP1A-206ENST00000549139 MOB2Q70IA6 237 aa19.99■□□□□ 0.79
CHMP1A-206ENST00000549139 ZNF296Q8WUU4 475 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-206ENST00000549139 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
CHMP1A-206ENST00000549139 UFL1O94874 794 aa19.98■□□□□ 0.79
CHMP1A-206ENST00000549139 ALDH1L2Q3SY69 923 aa19.98■□□□□ 0.79
CHMP1A-206ENST00000549139 ZBTB38Q8NAP3 1195 aaPredicted RBP19.98■□□□□ 0.79
CHMP1A-206ENST00000549139 DNAAF4Q8WXU2 420 aa19.98■□□□□ 0.79
CHMP1A-206ENST00000549139 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
CHMP1A-206ENST00000549139 MKI67P46013 3256 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-206ENST00000549139 TBC1D8O95759 1140 aa19.97■□□□□ 0.79
CHMP1A-206ENST00000549139 IGKV5-2P06315 115 aa19.97■□□□□ 0.79
CHMP1A-206ENST00000549139 NOM1Q5C9Z4 860 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-206ENST00000549139 MRPL50Q8N5N7 158 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-206ENST00000549139 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
CHMP1A-206ENST00000549139 GGA1Q9UJY5 639 aa19.97■□□□□ 0.79
CHMP1A-206ENST00000549139 UBE2Q2LH0YL09 131 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 PCCAP05165 728 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 USP17L8P0C7I0 530 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 TM4SF4P48230 202 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 SSH1Q8WYL5 1049 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 ANKIB1Q9P2G1 1089 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 HDAC9Q9UKV0 1011 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 SCAF8Q9UPN6 1271 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 HTTP42858 3142 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
CHMP1A-206ENST00000549139 KIAA0100Q14667 2235 aaKnown RBP19.95■□□□□ 0.78
CHMP1A-206ENST00000549139 MYH3P11055 1940 aa19.95■□□□□ 0.78
CHMP1A-206ENST00000549139 NEURL1BA8MQ27 555 aa19.94■□□□□ 0.78
CHMP1A-206ENST00000549139 G3V3G9 751 aa19.94■□□□□ 0.78
CHMP1A-206ENST00000549139 GPR25O00155 361 aa19.94■□□□□ 0.78
CHMP1A-206ENST00000549139 HSP90B1P14625 803 aaKnown RBP19.94■□□□□ 0.78
CHMP1A-206ENST00000549139 CWF19L2Q2TBE0 894 aaKnown RBP19.94■□□□□ 0.78
CHMP1A-206ENST00000549139 DCAF8Q5TAQ9 597 aa19.94■□□□□ 0.78
CHMP1A-206ENST00000549139 LINS1Q8NG48 757 aa19.94■□□□□ 0.78
CHMP1A-206ENST00000549139 PRAMEF18Q5VWM3 479 aa19.93■□□□□ 0.78
CHMP1A-206ENST00000549139 FBXO46Q6PJ61 603 aaPredicted RBP19.93■□□□□ 0.78
CHMP1A-206ENST00000549139 PODNQ7Z5L7 613 aa19.93■□□□□ 0.78
CHMP1A-206ENST00000549139 CFHR5Q9BXR6 569 aa19.93■□□□□ 0.78
CHMP1A-206ENST00000549139 ZNF646O15015 1829 aaPredicted RBP19.92■□□□□ 0.78
CHMP1A-206ENST00000549139 USP17L3A6NCW0 530 aa19.92■□□□□ 0.78
CHMP1A-206ENST00000549139 USP17L4A6NCW7 530 aa19.92■□□□□ 0.78
CHMP1A-206ENST00000549139 F6X3S4 739 aa19.92■□□□□ 0.78
CHMP1A-206ENST00000549139 NBPF9Q3BBW0 867 aa19.92■□□□□ 0.78
CHMP1A-206ENST00000549139 USP17L1Q7RTZ2 530 aa19.92■□□□□ 0.78
CHMP1A-206ENST00000549139 PTPRCP08575 1304 aa19.92■□□□□ 0.78
CHMP1A-206ENST00000549139 WTIPA6NIX2 430 aaPredicted RBP19.91■□□□□ 0.78
CHMP1A-206ENST00000549139 H7C1W4 665 aa19.91■□□□□ 0.78
CHMP1A-206ENST00000549139 GCKRQ14397 625 aa19.91■□□□□ 0.78
CHMP1A-206ENST00000549139 BEND3Q5T5X7 828 aa19.91■□□□□ 0.78
CHMP1A-206ENST00000549139 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
CHMP1A-206ENST00000549139 XDHP47989 1333 aa19.91■□□□□ 0.78
CHMP1A-206ENST00000549139 CENPFP49454 3210 aa19.9■□□□□ 0.78
CHMP1A-206ENST00000549139 PDE8AO60658 829 aa19.9■□□□□ 0.78
CHMP1A-206ENST00000549139 ATP2B4P23634 1241 aa19.9■□□□□ 0.78
CHMP1A-206ENST00000549139 CCDC152Q4G0S7 254 aa19.9■□□□□ 0.78
CHMP1A-206ENST00000549139 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
CHMP1A-206ENST00000549139 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-206ENST00000549139 WNT10BO00744 389 aa19.88■□□□□ 0.77
CHMP1A-206ENST00000549139 RARSP54136 660 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-206ENST00000549139 DACT2Q5SW24 774 aa19.88■□□□□ 0.77
CHMP1A-206ENST00000549139 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
CHMP1A-206ENST00000549139 MXD3Q9BW11 206 aa19.88■□□□□ 0.77
CHMP1A-206ENST00000549139 BRCA2P51587 3418 aa19.88■□□□□ 0.77
CHMP1A-206ENST00000549139 CEP290O15078 2479 aa19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 MED23Q9ULK4 1368 aa19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 FKTNO75072 461 aa19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 ALDH1L1O75891 902 aa19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 PTPN12Q05209 780 aaKnown RBP19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 MKRN3Q13064 507 aaKnown RBP19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 SLC4A10Q6U841 1118 aa19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 ANKRD18AQ8IVF6 992 aa19.87■□□□□ 0.77
CHMP1A-206ENST00000549139 CASP7P55210 303 aa19.86■□□□□ 0.77
CHMP1A-206ENST00000549139 SREBF2Q12772 1141 aa19.86■□□□□ 0.77
CHMP1A-206ENST00000549139 TTLL12Q14166 644 aaPredicted RBP19.86■□□□□ 0.77
CHMP1A-206ENST00000549139 UBE3BQ7Z3V4 1068 aa19.86■□□□□ 0.77
CHMP1A-206ENST00000549139 SRCIN1Q9C0H9 1055 aa19.86■□□□□ 0.77
CHMP1A-206ENST00000549139 LDLRAD1Q5T700 205 aa19.85■□□□□ 0.77
CHMP1A-206ENST00000549139 PLA2G12BQ9BX93 195 aa19.85■□□□□ 0.77
CHMP1A-206ENST00000549139 STRIP1Q5VSL9 837 aa19.84■□□□□ 0.77
CHMP1A-206ENST00000549139 GCC1Q96CN9 775 aa19.84■□□□□ 0.77
CHMP1A-206ENST00000549139 NOB1Q9ULX3 412 aaKnown RBP19.84■□□□□ 0.77
CHMP1A-206ENST00000549139 MINPP1Q9UNW1 487 aa19.84■□□□□ 0.77
CHMP1A-206ENST00000549139 MYO3BQ8WXR4 1341 aa19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 SASH1O94885 1247 aa19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 NF2P35240 595 aa19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 SPRYD7Q5W111 196 aa19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 OGFOD1Q8N543 542 aa19.83■□□□□ 0.77
CHMP1A-206ENST00000549139 TTLL11Q8NHH1 800 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms