RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 SLC36A3Q495N2 470 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 IFI44LQ53G44 452 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 ZNF826PQ6ZT77 177 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 CYP4Z1Q86W10 505 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 DHFR2Q86XF0 187 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 LINC00346Q8IVM7 164 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 CMTM4Q8IZR5 234 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 OR6V1Q8N148 313 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 GCSAMQ8N6F7 178 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 RNF148Q8N7C7 305 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 LY6G5BQ8NDX9 201 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 SLC26A10Q8NG04 563 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 OR5R1Q8NH85 324 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 SLC7A13Q8TCU3 470 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 RSRC1Q96IZ7 334 aaKnown RBP10.4□□□□□ -0.74
SHMT2-223ENST00000556689 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 CADM1Q9BY67 442 aaKnown RBP10.4□□□□□ -0.74
SHMT2-223ENST00000556689 PPA2Q9H2U2 334 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 CMTM6Q9NX76 183 aa10.4□□□□□ -0.74
SHMT2-223ENST00000556689 MRPL15Q9P015 296 aaKnown RBP10.4□□□□□ -0.74
SHMT2-223ENST00000556689 IGHV3OR15-7A0A075B7D8 119 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-223ENST00000556689 NPFFO15130 113 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 PAHP00439 452 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 GABRA5P31644 462 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 ZNF92Q03936 586 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
SHMT2-223ENST00000556689 MICBQ29980 383 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 MRAPQ8TCY5 172 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 SPTSSAQ969W0 71 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 PPP1R14AQ96A00 147 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 NSMCE2Q96MF7 247 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 ERMAPQ96PL5 475 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-223ENST00000556689 C14orf119Q9NWQ9 140 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 CYB5R1Q9UHQ9 305 aa10.39□□□□□ -0.75
SHMT2-223ENST00000556689 SAMD4AQ9UPU9 718 aaKnown RBP10.39□□□□□ -0.75
SHMT2-223ENST00000556689 A0A1W2PRD5 423 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 A0A1W2PRF3 423 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 A0A1W2PRM7 423 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 A0A1W2PRQ8 180 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 RNASEK-C17orf49H0YIS7 233 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 M0R135 149 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 CXCR6O00574 342 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 BHLHE40O14503 412 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 RENP00797 406 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 HLA-DQA2P01906 255 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 MUC1P15941 1255 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-223ENST00000556689 GRK5P34947 590 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 KIR2DS4P43632 304 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 OMPP47874 163 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 LOXL3P58215 753 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 FXYD6P3P58550 94 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 DGCR6Q14129 220 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 RFX4Q33E94 735 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 SNAI3Q3KNW1 292 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 C11orf88Q6PI97 169 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 SMARCD3Q6STE5 483 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 CBLL1Q75N03 491 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 ZNF799Q96GE5 643 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 NMNAT3Q96T66 252 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 CCL13Q99616 98 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 PNRC2Q9NPJ4 139 aaKnown RBP10.38□□□□□ -0.75
SHMT2-223ENST00000556689 SIRT7Q9NRC8 400 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 ACTR3BQ9P1U1 418 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 DNAJB11Q9UBS4 358 aa10.38□□□□□ -0.75
SHMT2-223ENST00000556689 MEIOCA2RUB1 952 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 UNC119BA6NIH7 251 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 ARPC2O15144 300 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 NDUFB3O43676 98 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 H1F0P07305 194 aaKnown RBP10.37□□□□□ -0.75
SHMT2-223ENST00000556689 PRB3Q04118 309 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-223ENST00000556689 C1orf122Q6ZSJ8 110 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 ZBTB46Q86UZ6 589 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 SPATA24Q86W54 205 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 Q8N7P7 452 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 CFHR4Q92496 578 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 CLPTM1LQ96KA5 538 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 YY1AP1Q9H869 796 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 RNPEPL1Q9HAU8 725 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 KRCC1Q9NPI7 259 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-223ENST00000556689 RPRD1BQ9NQG5 326 aaKnown RBP10.37□□□□□ -0.75
SHMT2-223ENST00000556689 FOXJ3Q9UPW0 622 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 SIGLEC9Q9Y336 463 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 FAM32AQ9Y421 112 aaKnown RBP10.37□□□□□ -0.75
SHMT2-223ENST00000556689 ENPP4Q9Y6X5 453 aa10.37□□□□□ -0.75
SHMT2-223ENST00000556689 A0A1B0GW55 424 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 ARPC3O15145 178 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 SERPINA1P01009 418 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4L2P0CJ85 424 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4L3P0CJ86 424 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4L4P0CJ87 422 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4L5P0CJ88 424 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4L6P0CJ89 424 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4L7P0CJ90 424 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 HIST1H1CP16403 213 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms