RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 OAZ3Q9UMX2 235 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 WNK2Q9Y3S1 2297 aa9.93□□□□□ -0.82
HDAC4-216ENST00000544989 hCG_38984A0A1B0GV85 526 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 ANXA2P2A6NMY6 339 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 CEACAM18A8MTB9 384 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 RNF212BA8MTL3 300 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 PHF1O43189 567 aaPredicted RBP9.92□□□□□ -0.82
HDAC4-216ENST00000544989 NDUFA2O43678 99 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 TCF21O43680 179 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 PRKYO43930 277 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 CYB5R3P00387 301 aaPredicted RBP9.92□□□□□ -0.82
HDAC4-216ENST00000544989 ATP6V1B1P15313 513 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 RPS2P15880 293 aaKnown RBP9.92□□□□□ -0.82
HDAC4-216ENST00000544989 GSK3AP49840 483 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 CDC42P60953 191 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 FAM3AP98173 230 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 IL5RAQ01344 420 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 ROM1Q03395 351 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 TMED1Q13445 227 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF829Q3KNS6 432 aaPredicted RBP9.92□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF404Q494X3 552 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 DCDC5Q6ZRR9 648 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 C1QL2Q7Z5L3 287 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF679Q8IYX0 411 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 OR8B3Q8NGG8 313 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF420Q8TAQ5 688 aaPredicted RBP9.92□□□□□ -0.82
HDAC4-216ENST00000544989 NANPQ8TBE9 248 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 SGK3Q96BR1 496 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 RAB3IPQ96QF0 476 aaPredicted RBP9.92□□□□□ -0.82
HDAC4-216ENST00000544989 OR8B2Q96RD0 313 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 GABARAPL3Q9BY60 117 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 TMEM165Q9HC07 324 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 HAO2Q9NYQ3 351 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 OR5V1Q9UGF6 321 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 WARS2Q9UGM6 360 aaKnown RBP9.92□□□□□ -0.82
HDAC4-216ENST00000544989 LRP12Q9Y561 859 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 MPC1Q9Y5U8 109 aa9.92□□□□□ -0.82
HDAC4-216ENST00000544989 SVEP1Q4LDE5 3571 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 TRAV38-1A0A0B4J264 116 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 A0A0U1RQV5 110 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 CCDC182A6NF36 153 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 MITFO75030 526 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 FAM20BO75063 409 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 NPY4RP50391 375 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 RIDAP52758 137 aaKnown RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 LCN2P80188 198 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 EFNB1P98172 346 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 OR8B8Q15620 311 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 AADACL4Q5VUY2 407 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 LRRN1Q6UXK5 716 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 TCEANCQ8N8B7 351 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 OR8J1Q8NGP2 316 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF418Q8TF45 676 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 TRUB1Q8WWH5 349 aaKnown RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 RFKQ969G6 155 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 NEIL1Q96FI4 390 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 AMELYQ99218 206 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 CIB1Q99828 191 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 MICU1Q9BPX6 476 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 MRI1Q9BV20 369 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 PAPOLGQ9BWT3 736 aaKnown RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 SSBP3Q9BWW4 388 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 SEMA6AQ9H2E6 1030 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 C7orf69Q9H7B7 122 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 METTL17Q9H7H0 456 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-216ENST00000544989 MOB1AQ9H8S9 216 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 BRD7Q9NPI1 651 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 DCAF16Q9NXF7 216 aa9.91□□□□□ -0.82
HDAC4-216ENST00000544989 TMEM269A0A1B0GVZ9 245 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 A6NLC8 198 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 TMEM210A6NLX4 147 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 ZNF670-ZNF695F2Z2N8 137 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 LGALS8O00214 317 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 CST4P01036 141 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 WNT2P09544 360 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 PPIAL4GP0DN37 164 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 PMELP40967 661 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 MAP2K3P46734 347 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 PRSS12P56730 875 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 GNB2P62879 340 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 EGR3Q06889 387 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 KPNB1Q14974 876 aaKnown RBP9.9□□□□□ -0.82
HDAC4-216ENST00000544989 GFOD2Q3B7J2 385 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 ZBTB37Q5TC79 503 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 PRAMEF6Q5VXH4 476 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 BTNL3Q6UXE8 466 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 USP43Q70EL4 1123 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 GALNT4Q8N4A0 578 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 FAM81AQ8TBF8 368 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 PYDC1Q8WXC3 89 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 HIST1H2AAQ96QV6 131 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 OR8B4Q96RC9 309 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 JMJD8Q96S16 334 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 TMEM246Q9BRR3 403 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 RTL8AQ9BWD3 113 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 TMPRSS13Q9BYE2 586 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 RIBC2Q9H4K1 309 aa9.9□□□□□ -0.82
HDAC4-216ENST00000544989 RNPEPL1Q9HAU8 725 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms