RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-215	ENST00000539712	TBX1	O43435	398 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	HMGN1	P05114	100 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	ANXA2	P07355	339 aa	Known RBP	13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	PPIAL4G	P0DN37	164 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	IGHV4-38-2	P0DP08	117 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	ANXA8	P13928	327 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	IRF2	P14316	349 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	PAICS	P22234	425 aa	Known RBP	13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	FPR2	P25090	351 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	DDOST	P39656	456 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	GNB2	P62879	340 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	BNIP1	Q12981	228 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	FAHD1	Q6P587	224 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	SIGLECL1	Q8N7X8	197 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	SPERT	Q8NA61	448 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	OR8B3	Q8NGG8	313 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	UPRT	Q96BW1	309 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	REEP6	Q96HR9	211 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	OR8B2	Q96RD0	313 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	MRI1	Q9BV20	369 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	C1orf123	Q9NWV4	160 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	DNAJC27	Q9NZQ0	273 aa		13.96	□□□□□ -0.17
DDB1-215	ENST00000539712	TRIM77	I1YAP6	450 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	LGALS8	O00214	317 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	TIPRL	O75663	272 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	GRP	P07492	148 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	HSD11B1	P28845	292 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	GSK3A	P49840	483 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	DAP	P51397	102 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	HCCS	P53701	268 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	ARMCX4	Q5H9R4	360 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	LRRN1	Q6UXK5	716 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	DOK3	Q7L591	496 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	GCSAM	Q8N6F7	178 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	ZNF454	Q8N9F8	522 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	OR52H1	Q8NGJ2	320 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	NRBF2	Q96F24	287 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	PLEKHA8	Q96JA3	519 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	JMJD8	Q96S16	334 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	YY1AP1	Q9H869	796 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	ZNF556	Q9HAH1	456 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	RHBDD3	Q9Y3P4	386 aa		13.95	□□□□□ -0.18
DDB1-215	ENST00000539712	CCDC182	A6NF36	153 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	C3orf80	F5H4A9	247 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	PHYH	O14832	338 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	PLAT	P00750	562 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	APOC1	P02654	83 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	LYN	P07948	512 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	H2BFM	P0C1H6	154 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	EGR1	P18146	543 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	ALOX5AP	P20292	161 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	ACKR3	P25106	362 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	NAA10	P41227	235 aa	Predicted RBP	13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	UBA52	P62987	128 aa	Known RBP	13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	OR8B8	Q15620	311 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	TIGD6	Q17RP2	521 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	NLRC3	Q7RTR2	1065 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	BOLL	Q8N9W6	283 aa	Known RBP	13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	THEM6	Q8WUY1	208 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	LYZL4	Q96KX0	146 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	SMURF1	Q9HCE7	757 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	BRD7	Q9NPI1	651 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	CLN8	Q9UBY8	286 aa		13.94	□□□□□ -0.18
DDB1-215	ENST00000539712	TRRAP	Q9Y4A5	3859 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	IGHV3OR16-10	A0A075B7F0	116 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	OOEP	A6NGQ2	149 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	ANKRD30BL	A7E2S9	258 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	PRR32	B1ATL7	298 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	CFP	P27918	469 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	EPHA2	P29317	976 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	CRISP1	P54107	249 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	EFNB1	P98172	346 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	SLC35D3	Q5M8T2	416 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	TEX36	Q5VZQ5	186 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	BTNL3	Q6UXE8	466 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	C9orf139	Q6ZV77	190 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	FAM90A1	Q86YD7	464 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	PARP8	Q8N3A8	854 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	OR1M1	Q8NGA1	313 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	TEAD3	Q99594	435 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	FGF23	Q9GZV9	251 aa	Predicted RBP	13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	OR10A2	Q9H208	303 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	SP140L	Q9H930	580 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	C14orf119	Q9NWQ9	140 aa		13.93	□□□□□ -0.18
DDB1-215	ENST00000539712	CSNK2B	P67870	215 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	ELF3	P78545	371 aa	Predicted RBP	13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	POU4F2	Q12837	409 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	APOF	Q13790	326 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	PTGES3	Q15185	160 aa	Known RBP	13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	C12orf54	Q6X4T0	127 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	ITPKC	Q96DU7	683 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	PGAM5	Q96HS1	289 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	TLNRD1	Q9H1K6	362 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	RASSF4	Q9H2L5	321 aa		13.92	□□□□□ -0.18
DDB1-215	ENST00000539712	RGCC	Q9H4X1	137 aa		13.92	□□□□□ -0.18

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