RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TRAV40A0A0B4J280 105 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 hCG_38984A0A1B0GV85 526 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 A8MXK9 166 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 PRODHO43272 600 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 GYPAP02724 150 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 WNT2P09544 360 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 ZNF12P17014 697 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 EGR1P18146 543 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 GNALP38405 381 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 OPRL1P41146 370 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 GATA4P43694 442 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 GSK3AP49840 483 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 CSNK2BP67870 215 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 FAM3AP98173 230 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 ZNF181Q2M3W8 571 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 COMMD2Q86X83 199 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 TEX29Q8N6K0 151 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 CELF2-AS1Q8N7Q2 184 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 PAPD5Q8NDF8 572 aaKnown RBP8.09□□□□□ -1.11
USP54-207ENST00000451492 OTOSQ8NHW6 89 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 LRTOMTQ8WZ04 291 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 SGK3Q96BR1 496 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 SUCNR1Q9BXA5 334 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 SLC22A4Q9H015 551 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 SEMA6AQ9H2E6 1030 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 OPA3Q9H6K4 179 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 ZNF319Q9P2F9 582 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 CTSZQ9UBR2 303 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 CLN8Q9UBY8 286 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 GTF2A1LQ9UNN4 478 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 INSIG2Q9Y5U4 225 aa8.09□□□□□ -1.11
USP54-207ENST00000451492 IGHV2-70DA0A0C4DH43 119 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 A0A1B0GWJ7 208 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 CCDC182A6NF36 153 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 G3V2T6 193 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 ADAM20O43506 726 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 PRKYO43930 277 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 CIB2O75838 187 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 APOC1P02654 83 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 HOXB6P17509 224 aaKnown RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 SLC2A5P22732 501 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 RASSF2P50749 326 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 HILS1P60008 231 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 PSMA6P60900 246 aaKnown RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 ELF3P78545 371 aaPredicted RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 PTGES3Q15185 160 aaKnown RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 ATP6AP1Q15904 470 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 KLF17Q5JT82 389 aaPredicted RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 SLC35D3Q5M8T2 416 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 LCN1P1Q5VSP4 162 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 FAHD1Q6P587 224 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 BTNL3Q6UXE8 466 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 DCDC5Q6ZRR9 648 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 KCTD8Q6ZWB6 473 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 WDR86Q86TI4 376 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 BCL6BQ8N143 479 aaPredicted RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 PARP8Q8N3A8 854 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 GCSAMQ8N6F7 178 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 TCEANCQ8N8B7 351 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 OR8B12Q8NGG6 310 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 FAM81AQ8TBF8 368 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 Q8TCH9 128 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 LRRC29Q8WV35 223 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 SPSB4Q96A44 273 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 NUDT16L1Q9BRJ7 211 aaKnown RBP8.08□□□□□ -1.12
USP54-207ENST00000451492 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 SP140LQ9H930 580 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 ESM1Q9NQ30 184 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 C14orf119Q9NWQ9 140 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 ZNF69Q9UC07 566 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 IKZF2Q9UKS7 526 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 COPS3Q9UNS2 423 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 RHBDD3Q9Y3P4 386 aa8.08□□□□□ -1.12
USP54-207ENST00000451492 PPIAL4CA0A0B4J2A2 164 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 MDFIC2A0A1B0GVS7 189 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 A0A1B0GW55 424 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 OOEPA6NGQ2 149 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 SAC3D1A6NKF1 404 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 ZNF850A8MQ14 1090 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 TRIM77I1YAP6 450 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 LGALS8O00214 317 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 FSHBP01225 129 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 TFF1P04155 84 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4L2P0CJ85 424 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4L3P0CJ86 424 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4L4P0CJ87 422 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4L5P0CJ88 424 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4L6P0CJ89 424 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4L7P0CJ90 424 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 IGHV4-38-2P0DP08 117 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 ACKR3P25106 362 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 FASP25445 335 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 EPHA2P29317 976 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 MZT1Q08AG7 82 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 PRDX4Q13162 271 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 DMRTC1Q5HYR2 192 aa8.07□□□□□ -1.12
USP54-207ENST00000451492 WDR25Q64LD2 544 aaPredicted RBP8.07□□□□□ -1.12
USP54-207ENST00000451492 DUX4L9Q6RFH8 374 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms