RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CARD18P57730 90 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 PNOCQ13519 176 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 HNRNPA1L2Q32P51 320 aaKnown RBP3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 ABCA11PQ4W5N1 156 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 Q5W150 140 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 RXFP4Q8TDU9 374 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 FAM131CQ96AQ9 280 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 FGF23Q9GZV9 251 aaPredicted RBP3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 GAL3ST2Q9H3Q3 398 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 WFDC1Q9HC57 220 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 SIRT7Q9NRC8 400 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 NECAP2Q9NVZ3 263 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 RHBDL2Q9NX52 303 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 UBIAD1Q9Y5Z9 338 aa3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 BZW2Q9Y6E2 419 aaKnown RBP3.31□□□□□ -1.88
RNU6-40P-201ENST00000384254 C7orf66A4D0T2 115 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 UPK1BO75841 260 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 IGHV3-11P01762 117 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 HSPD1P10809 573 aaKnown RBP3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 APLNRP35414 380 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 CSKP41240 450 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 CXCL12P48061 93 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 TAS2R39P59534 338 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 PSMC5P62195 406 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 EIF4EBP1Q13541 118 aaPredicted RBP3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 COX19Q49B96 90 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 ZFP1Q6P2D0 407 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 CD300LGQ6UXG3 332 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 H1FOOQ8IZA3 346 aaPredicted RBP3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 LINC00469Q8N7U9 141 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 WDR31Q8NA23 367 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR52P1PQ8NH57 321 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 ZNF461Q8TAF7 563 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 LINC01560Q8TB33 94 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 CDS1Q92903 461 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR10C1Q96KK4 312 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 DOK1Q99704 481 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 RBBP8Q99708 897 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 SPIN2AQ99865 258 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 SPIN2BQ9BPZ2 258 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 KCNS3Q9BQ31 491 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 EMC6Q9BV81 110 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 GGTLC1Q9BX51 225 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 EXOSC4Q9NPD3 245 aaKnown RBP3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 CES1P1Q9UKY3 287 aa3.3□□□□□ -1.88
RNU6-40P-201ENST00000384254 MYO10Q9HD67 2058 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 PCM1Q15154 2024 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 PTPRTO14522 1441 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 KIF27Q86VH2 1401 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 MROH5Q6ZUA9 1318 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 A0A1W2PNU3 283 aaPredicted RBP3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 H0YJW9 148 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 GLSO94925 669 aaPredicted RBP3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 CSTAP01040 98 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 OXTP01178 125 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 GCGP01275 180 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 LINC00869P0C866 280 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 PTNP21246 168 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 ME2P23368 584 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 CD70P32970 193 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 ERFP50548 548 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 CCNG1P51959 295 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 PAFAH1B2P68402 229 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 PITPNAQ00169 270 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 YIF1BQ5BJH7 314 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 LINC00336Q6ZUF6 198 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 TTLQ8NG68 377 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR10Z1Q8NGY1 313 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 LINC00477Q96M19 166 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 KIR3DX1Q9H7L2 352 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 TREX1Q9NSU2 369 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 ZMAT5Q9UDW3 170 aaKnown RBP3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 RFNGQ9Y644 331 aa3.29□□□□□ -1.88
RNU6-40P-201ENST00000384254 CENPVL3A0A0U1RRI6 287 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 TMEM150BA6NC51 233 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR5H1A6NKK0 313 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 DFFAO00273 331 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 MYL12BO14950 172 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 CTNSO60931 367 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 GATBO75879 557 aaKnown RBP3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 PLEKHA8P1O95397 391 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 TTC4O95801 387 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 MT-ND4P03905 459 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 IL4P05112 153 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 MUC1P15941 1255 aaPredicted RBP3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 LINC00315P59091 139 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 SIGLEC14Q08ET2 396 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR1Q1Q15612 314 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 OPN5Q6U736 354 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 SHISA6Q6ZSJ9 500 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 ERO1BQ86YB8 467 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR13C9Q8NGT0 318 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR1S1Q8NH92 325 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 ING5Q8WYH8 240 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 OR8D1Q8WZ84 308 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 RDH12Q96NR8 316 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
RNU6-40P-201ENST00000384254 TM6SF2Q9BZW4 377 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms