RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DDX28Q9NUL7 540 aaKnown RBP11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 TMEM100Q9NV29 134 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
VPS9D1-204ENST00000565023 GGT3PA6NGU5 568 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 M0R129 80 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 TBX1O43435 398 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 IGHV2-70P01814 119 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 ADRA2CP18825 462 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 SRP9P49458 86 aaKnown RBP11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 MMP16P51512 607 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 APOFQ13790 326 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 ZMYND11Q15326 602 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 FAM201AQ5SY85 155 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 GLYATL3Q5SZD4 288 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 DCAF12L2Q5VW00 463 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 PRAMEF6Q5VXH4 476 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 NXNL2Q5VZ03 156 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 COLCA1Q6ZS62 124 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 DPY19L4Q7Z388 723 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 HRASLS5Q96KN8 279 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 TEAD3Q99594 435 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 SLC30A2Q9BRI3 323 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 GCM1Q9NP62 436 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 UFSP2Q9NUQ7 469 aa11.48□□□□□ -0.57
VPS9D1-204ENST00000565023 A0A0G2JMP0 313 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 A0A0X1KG70 313 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 CCDC182A6NF36 153 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 TMEM178BH3BS89 294 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 TCF21O43680 179 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 SELENOFO60613 162 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 AVPP01185 164 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 CA6P23280 308 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 HSD11B1P28845 292 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 OTX1P32242 354 aaPredicted RBP11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 SEC61A1P61619 476 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 RPS7P62081 194 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 BTG1P62324 171 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 ELF3P78545 371 aaPredicted RBP11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF92Q03936 586 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 ZIK1Q3SY52 487 aaPredicted RBP11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 SHFQ7M4L6 423 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 BCDIN3DQ7Z5W3 292 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 KLHL36Q8N4N3 616 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 SPICQ8N5J4 248 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 BOLLQ8N9W6 283 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 C19orf18Q8NEA5 215 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 OR4M2Q8NGB6 313 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 OR8J1Q8NGP2 316 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 SIGLEC11Q96RL6 698 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 MBOAT4Q96T53 435 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 KCNJ15Q99712 375 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 TOR3AQ9H497 397 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 BRD7Q9NPI1 651 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 G6PC2Q9NQR9 355 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 DNAJC27Q9NZQ0 273 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 DOCK11Q5JSL3 2073 aa11.47□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF878C9JN71 531 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 ANXA2P07355 339 aaKnown RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 ZFP36P26651 326 aaKnown RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 CX3CR1P49238 355 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 CDC42P60953 191 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 HOXA4Q00056 320 aaPredicted RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 OR8G1Q15617 311 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 GFOD2Q3B7J2 385 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 LCN1P1Q5VSP4 162 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 LIPNQ5VXI9 398 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 DRAM2Q6UX65 266 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 C1orf229Q6ZS94 237 aaPredicted RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 RHOUQ7L0Q8 258 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 MEPCEQ7L2J0 689 aaKnown RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 ZNF454Q8N9F8 522 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 OTOSQ8NHW6 89 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 TRUB1Q8WWH5 349 aaKnown RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 RDH12Q96NR8 316 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 ABHD6Q9BV23 337 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 C19orf24Q9BVV8 132 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 TMPRSS13Q9BYE2 586 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 C7orf69Q9H7B7 122 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 PATZ1Q9HBE1 687 aaKnown RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 C8orf4Q9NR00 106 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 HAO2Q9NYQ3 351 aa11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 H2AFY2Q9P0M6 372 aaPredicted RBP11.46□□□□□ -0.57
VPS9D1-204ENST00000565023 SVEP1Q4LDE5 3571 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC22A31A6NKX4 558 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 CD300LBA8K4G0 201 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 FOXH1O75593 365 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 IRF2P14316 349 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 RPS2P15880 293 aaKnown RBP11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 MDH2P40926 338 aaKnown RBP11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 PMELP40967 661 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 NAA10P41227 235 aaPredicted RBP11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 MAB21L1Q13394 359 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 FAM57BQ71RH2 274 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 SLC16A9Q7RTY1 509 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 LRRC28Q86X40 367 aaPredicted RBP11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 GID4Q8IVV7 300 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 RFLNBQ8N5W9 214 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 DEFB108BQ8NET1 73 aa11.45□□□□□ -0.58
VPS9D1-204ENST00000565023 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms