RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZNF107Q9UII5 783 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-216ENST00000559819 CHCHD2Q9Y6H1 151 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF726A6NNF4 738 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 B8ZZF3 427 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 SIGLEC5O15389 551 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 TPD52L2O43399 206 aaKnown RBP8.87□□□□□ -0.99
LRRC28-216ENST00000559819 CD8AP01732 235 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 HCKP08631 526 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 CALCRP30988 508 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 CASRP41180 1078 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 CAPZA1P52907 286 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 SIGLEC14Q08ET2 396 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 CLVS2Q5SYC1 327 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 MRPL14Q6P1L8 145 aaKnown RBP8.87□□□□□ -0.99
LRRC28-216ENST00000559819 FADS6Q8N9I5 356 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 ADPRHL1Q8NDY3 354 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 MARCH1Q8TCQ1 289 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 EDAQ92838 391 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 CLDN23Q96B33 292 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 TMEM41AQ96HV5 264 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF75AQ96N20 296 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF416Q9BWM5 594 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 SLC2A8Q9NY64 477 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 PRR13Q9NZ81 148 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
LRRC28-216ENST00000559819 IGKV1-9A0A0C4DH69 117 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 AQP7P3A6NL99 342 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 CDC14BO60729 498 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 ERCC1P07992 297 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-216ENST00000559819 PNLIPP16233 465 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 ZP3P21754 424 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 TUSC1Q2TAM9 212 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 HLA-BQ31612 363 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 PXDC1Q5TGL8 231 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 SLC51BQ86UW2 128 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 STPG2Q8N412 459 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 OR5M9Q8NGP3 310 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 ELP5Q8TE02 316 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 PPP1R1CQ8WVI7 109 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 C19orf25Q9UFG5 118 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-216ENST00000559819 PISDQ9UG56 409 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 GPR160Q9UJ42 338 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 OR5H15A6NDH6 313 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 EEF1E1-BLOC1S5C9J1V9 151 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 CRTAPO75718 401 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-216ENST00000559819 WDPCPO95876 746 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 M6PRP20645 277 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 LUMP51884 338 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-216ENST00000559819 TMEM50BP56557 158 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 IL13RA1P78552 427 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 HIST3H3Q16695 136 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 MICBQ29980 383 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 C11orf87Q6NUJ2 197 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 HDDC2Q7Z4H3 204 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 PDZD9Q8IXQ8 264 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 OR4K15Q8NH41 348 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 JSRP1Q96MG2 331 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-216ENST00000559819 GNRHR2Q96P88 292 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 GPER1Q99527 375 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 VRK1Q99986 396 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-216ENST00000559819 DUSP23Q9BVJ7 150 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 MOB1AQ9H8S9 216 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 TNFSF18Q9UNG2 199 aa8.86□□□□□ -0.99
LRRC28-216ENST00000559819 SNAPC5O75971 98 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 IL2RAP01589 272 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 IFNA6P05013 189 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 CCL3P10147 92 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 DLSTP36957 453 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 NUP62P37198 522 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-216ENST00000559819 JMJD6Q6NYC1 403 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-216ENST00000559819 C1QL2Q7Z5L3 287 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 LRRC18Q8N456 261 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 ZDHHC22Q8N966 263 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 OR10K1Q8NGX5 313 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 MAFIPQ8WZ33 124 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 ARHGAP5-AS1Q96IT6 56 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 LYZL4Q96KX0 146 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF385AQ96PM9 386 aaKnown RBP8.85□□□□□ -0.99
LRRC28-216ENST00000559819 UCN2Q96RP3 112 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 CACNA1EQ15878 2313 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 RNF222A6NCQ9 220 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 F5H5K5 113 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 EFSO43281 561 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 UMODP07911 640 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 NPY4RP50391 375 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 TMPPEQ6ZT21 453 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 OR14K1Q8NGZ2 314 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 IFI44Q8TCB0 444 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 MITD1Q8WV92 249 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 HLA-CQ95604 372 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 ZNF775Q96BV0 537 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-216ENST00000559819 RAB3CQ96E17 227 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 PGAM5Q96HS1 289 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 TMEM59Q9BXS4 323 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 COMMD9Q9P000 198 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 GPN3Q9UHW5 284 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-216ENST00000559819 SIT1Q9Y3P8 196 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 EML6Q6ZMW3 1958 aa8.85□□□□□ -0.99
LRRC28-216ENST00000559819 C13orf42A0A1B0GVH6 325 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms