RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CELF6Q96J87 481 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 AKR1E2Q96JD6 320 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 KCTD7Q96MP8 289 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 OPALINQ96PE5 141 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR2M2Q96R28 347 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 KCNA7Q96RP8 456 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 GPR21Q99679 349 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TTYH2Q9BSA4 534 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 URM1Q9BTM9 101 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 WRAP53Q9BUR4 548 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 C20orf24Q9BUV8 137 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 UCK2Q9BZX2 261 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SAV1Q9H4B6 383 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZDHHC4Q9NPG8 344 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 TIGARQ9NQ88 270 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZC4H2Q9NQZ6 224 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 FGF21Q9NSA1 209 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 VNN3Q9NY84 501 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF226Q9NYT6 803 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 B3GAT1Q9P2W7 334 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF282Q9UDV7 671 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 NUFIP1Q9UHK0 495 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF490Q9ULM2 529 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 ABCG2Q9UNQ0 655 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 DIMT1Q9UNQ2 313 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SCML2Q9UQR0 700 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 POLR3HQ9Y535 204 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 NUBP2Q9Y5Y2 271 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 KPTNQ9Y664 436 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 CDH10Q9Y6N8 788 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 COL11A1P12107 1806 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 DSPPQ9NZW4 1301 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 MGAMO43451 1857 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SBF1O95248 1867 aa3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 PDCD11Q14690 1871 aaKnown RBP3.11□□□□□ -1.91
HMGB3P23-201ENST00000414981 SCN1AP35498 2009 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A0A6YYH2 397 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A0X1KG70 313 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 A0A1W2PQL4 384 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRSS37A4D1T9 235 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 A6NJ64 397 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 E5RI56 91 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 INMT-MINDY4F8WBC2 141 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 MKRN2OSH3BPM6 223 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SIVA1O15304 175 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 LATO43561 262 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 NME2P1O60361 137 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR10H2O60403 315 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ADAP1O75689 374 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 STK16O75716 305 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SC5DO75845 299 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAB36O95755 333 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF682O95780 498 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 IGLV3-27P01718 113 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 HLA-DPB1P04440 258 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 C8GP07360 202 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ANXA5P08758 320 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 HOXD4P09016 255 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR4E1P0C645 316 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 TSPAN19P0C672 248 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 RD3LP0DJH9 198 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 STOMP27105 288 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PRDX3P30048 256 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OTX1P32242 354 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 XCR1P46094 333 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 BRCC3P46736 316 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 CAPZBP47756 277 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 RGRP47804 291 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 CDX1P47902 265 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 RFX3P48380 749 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 INPP1P49441 399 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ASCL1P50553 236 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ACLYP53396 1101 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 CRISP1P54107 249 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 MAZP56270 477 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 WNT4P56705 351 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 RPL38P63173 70 aaKnown RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 DLK1P80370 383 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 DHODHQ02127 395 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 RAB40BQ12829 278 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ZNF235Q14590 738 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 ITPRIPL2Q3MIP1 535 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SPIN4Q56A73 249 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 PYDC2Q56P42 97 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 XKR6Q5GH73 641 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 C6orf226Q5I0X4 101 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 LIPKQ5VXJ0 399 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 C12orf73Q69YU5 71 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 LAMTOR1Q6IAA8 161 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 OR2A2Q6IF42 318 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 TRIM40Q6P9F5 258 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 DOK6Q6PKX4 331 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 UQCC3Q6UW78 93 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 SBSNQ6UWP8 590 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 CD300LGQ6UXG3 332 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 GLT6D1Q7Z4J2 308 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 HSD17B13Q7Z5P4 300 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 GALNT10Q86SR1 603 aa3.1□□□□□ -1.91
HMGB3P23-201ENST00000414981 LRRC28Q86X40 367 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms