RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CD300LBA8K4G0 201 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 M0QZ24 198 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 TIMM23O14925 209 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 IDH3BO43837 385 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 TOX4O94842 621 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 LCATP04180 440 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 H2AFXP16104 143 aaPredicted RBP9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 GGT2P36268 569 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 SMIM11AP58511 58 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 RELBQ01201 579 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 KRT72Q14CN4 511 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 OR8G1Q15617 311 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 MPPED2Q15777 294 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 METTL11BQ5VVY1 283 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 PRAMEF6Q5VXH4 476 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 BRICD5Q6PL45 260 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 ZNF620Q6ZNG0 422 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 MRPL21Q7Z2W9 205 aaKnown RBP9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 LINC00346Q8IVM7 164 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 TBC1D15Q8TC07 691 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 FANK1Q8TC84 345 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 DYRK2Q92630 601 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 WDFY2Q96P53 400 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 TECTBQ96PL2 329 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 TBX15Q96SF7 602 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 MMP27Q9H306 513 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 OR52D1Q9H346 318 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 MMADHCQ9H3L0 296 aaPredicted RBP9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 MARCH7Q9H992 704 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 RPRD1BQ9NQG5 326 aaKnown RBP9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 UFSP2Q9NUQ7 469 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 ACOXLQ9NUZ1 547 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 PDP1Q9P0J1 537 aaPredicted RBP9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 CTSZQ9UBR2 303 aa9.96□□□□□ -0.82
CBX3P4-202ENST00000540428 OOEPA6NGQ2 149 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 M0R135 149 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 CCDC22O60826 627 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 SFTPBP07988 381 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 NCK1P16333 377 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 HIST1H1CP16403 213 aaKnown RBP9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 CA6P23280 308 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 PRSS12P56730 875 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 MZT1Q08AG7 82 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 RUSC1-AS1Q66K80 236 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 GLYATQ6IB77 296 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 NAA40Q86UY6 237 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 SPERTQ8NA61 448 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 C19orf18Q8NEA5 215 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 OR4K13Q8NH42 304 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 SPTSSAQ969W0 71 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 ZNF799Q96GE5 643 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 ADAT1Q9BUB4 502 aaKnown RBP9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 TRIM15Q9C019 465 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 SIRPDQ9H106 197 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 CCDC134Q9H6E4 229 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 TNFRSF19Q9NS68 423 aa9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 DCAF13Q9NV06 445 aaKnown RBP9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 MRPL15Q9P015 296 aaKnown RBP9.95□□□□□ -0.82
CBX3P4-202ENST00000540428 IGHV1-69DA0A0B4J2H0 117 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 ADAM20O43506 726 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 SASH3O75995 380 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 CLPXO76031 633 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 GADD45GO95257 159 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 ECDO95905 644 aaPredicted RBP9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 IGHV1-69P01742 117 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 HLA-DQA2P01906 255 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 NOS3P29474 1203 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 OTX1P32242 354 aaPredicted RBP9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 NUDT2P50583 147 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 SRSF4Q08170 494 aaKnown RBP9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 OR8B8Q15620 311 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 SFRP4Q6FHJ7 346 aaPredicted RBP9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 DRAM2Q6UX65 266 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 LDLRAD3Q86YD5 345 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 OR52J3Q8NH60 311 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 MAP6Q96JE9 813 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 CCT8L2Q96SF2 557 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 IFT27Q9BW83 186 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 OPA3Q9H6K4 179 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 SMURF1Q9HCE7 757 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 MRPL22Q9NWU5 206 aaKnown RBP9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 KAAG1Q9UBP8 84 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 RNF114Q9Y508 228 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 DOCK11Q5JSL3 2073 aa9.94□□□□□ -0.82
CBX3P4-202ENST00000540428 OR6C68A6NDL8 312 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 GGT3PA6NGU5 568 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 GPR137BO60478 399 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 GMNNO75496 209 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 DIRAS1O95057 198 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 ZNF823P16415 610 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 IFNGR2P38484 337 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 PSME3P61289 254 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 ZNF92Q03936 586 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 SNAI3Q3KNW1 292 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 TEX36Q5VZQ5 186 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 RHOUQ7L0Q8 258 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 SDR9C7Q8NEX9 313 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 OR4C15Q8NGM1 316 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms