RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 LOXL1Q08397 574 aaPredicted RBP12.11□□□□□ -0.47
CNN1-201ENST00000252456 RIN1Q13671 783 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 APOFQ13790 326 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 KLHL12Q53G59 568 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 SLC35D3Q5M8T2 416 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 CLEC9AQ6UXN8 241 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 Q6ZR03 302 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
CNN1-201ENST00000252456 BCDIN3DQ7Z5W3 292 aaKnown RBP12.11□□□□□ -0.47
CNN1-201ENST00000252456 YIPF5Q969M3 257 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 HAVCR1Q96D42 359 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 ZNF799Q96GE5 643 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 COG8Q96MW5 612 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 RBM4BQ9BQ04 359 aaKnown RBP12.11□□□□□ -0.47
CNN1-201ENST00000252456 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 TEX12Q9BXU0 123 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 BPESC1Q9GZL8 116 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 MSL2Q9HCI7 577 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 GPR160Q9UJ42 338 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 KLHDC2Q9Y2U9 406 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 SONP18583 2426 aaKnown RBP12.11□□□□□ -0.47
CNN1-201ENST00000252456 C2CD3Q4AC94 2353 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 ZNF878C9JN71 531 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 HEXAP06865 529 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 RAC2P15153 192 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 COL8A2P25067 703 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 PRSS12P56730 875 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 EIF2B1Q14232 305 aaKnown RBP12.11□□□□□ -0.47
CNN1-201ENST00000252456 CARTPTQ16568 116 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 MOGQ16653 247 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 PCGF3Q3KNV8 242 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 SNAI3Q3KNW1 292 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 SPRNQ5BIV9 151 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 SPATC1Q76KD6 591 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 CBR4Q8N4T8 237 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 TCEANCQ8N8B7 351 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 OTOSQ8NHW6 89 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 RNF133Q8WVZ7 376 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 PIMREGQ9BSJ6 248 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 USE1Q9NZ43 259 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 CGGBP1Q9UFW8 167 aaPredicted RBP12.11□□□□□ -0.47
CNN1-201ENST00000252456 ENOPH1Q9UHY7 261 aa12.11□□□□□ -0.47
CNN1-201ENST00000252456 SVEP1Q4LDE5 3571 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 HIVEP2P31629 2446 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 PLSCR5A0PG75 271 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 E9PQ18 207 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 TIMM8AO60220 97 aaPredicted RBP12.1□□□□□ -0.47
CNN1-201ENST00000252456 LILRA1O75019 489 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 LYNP07948 512 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 NAA10P41227 235 aaPredicted RBP12.1□□□□□ -0.47
CNN1-201ENST00000252456 TPTEP56180 551 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 MRPS11P82912 194 aaKnown RBP12.1□□□□□ -0.47
CNN1-201ENST00000252456 GK2Q14410 553 aaPredicted RBP12.1□□□□□ -0.47
CNN1-201ENST00000252456 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 AADACL4Q5VUY2 407 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 OR5L1Q8NGL2 311 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 TMEM163Q8TC26 289 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 SPTSSAQ969W0 71 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 TEAD3Q99594 435 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 KCNJ15Q99712 375 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 COPS4Q9BT78 406 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 CENPMQ9NSP4 180 aa12.1□□□□□ -0.47
CNN1-201ENST00000252456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNN1-201ENST00000252456 SPRY3O43610 288 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 TLX2O43763 284 aaPredicted RBP12.09□□□□□ -0.47
CNN1-201ENST00000252456 MT-ND5P03915 603 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 LCATP04180 440 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 LIPAP38571 399 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 OPRL1P41146 370 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 PRKXP51817 358 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 CDK5R2Q13319 367 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
CNN1-201ENST00000252456 OR2T2Q6IF00 324 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 DRAM2Q6UX65 266 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 SHFQ7M4L6 423 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 RDH5Q92781 318 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 IL4I1Q96RQ9 567 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 PRRG3Q9BZD7 231 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 RIBC2Q9H4K1 309 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 MALRD1Q5VYJ5 2156 aa12.09□□□□□ -0.47
CNN1-201ENST00000252456 NAV3Q8IVL0 2385 aa12.08□□□□□ -0.47
CNN1-201ENST00000252456 DLGAP1O14490 977 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 CD55P08174 381 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 SLC2A1P11166 492 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 ALOX5APP20292 161 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 ACHEP22303 614 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
CNN1-201ENST00000252456 SLC6A9P48067 706 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 HCCSP53701 268 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 RPS7P62081 194 aaKnown RBP12.08□□□□□ -0.48
CNN1-201ENST00000252456 GGTLC2Q14390 218 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 NXNL2Q5VZ03 156 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
CNN1-201ENST00000252456 PRSS45Q7RTY3 260 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms